Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm7456-201ENSMUST00000182862 1011 ntBASIC10.69□□□□□ -0.7
Chd8Q09XV5 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.69□□□□□ -0.7
Chd8Q09XV5 Gm42908-201ENSMUST00000197508 870 ntBASIC10.69□□□□□ -0.7
Chd8Q09XV5 BB187690-201ENSMUST00000198619 1176 ntBASIC10.69□□□□□ -0.7
Chd8Q09XV5 AC102312.1-202ENSMUST00000218600 851 ntTSL 2 BASIC10.69□□□□□ -0.7
Chd8Q09XV5 Gm7525-201ENSMUST00000219425 454 ntBASIC10.69□□□□□ -0.7
Chd8Q09XV5 AC102847.1-202ENSMUST00000226313 1245 ntBASIC10.69□□□□□ -0.7
Chd8Q09XV5 AC118639.1-202ENSMUST00000226957 653 ntBASIC10.69□□□□□ -0.7
Chd8Q09XV5 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Chd8Q09XV5 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC10.68□□□□□ -0.7
Chd8Q09XV5 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC10.68□□□□□ -0.7
Chd8Q09XV5 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chd8Q09XV5 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chd8Q09XV5 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Chd8Q09XV5 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chd8Q09XV5 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Chd8Q09XV5 Il17rd-203ENSMUST00000225146 3366 ntBASIC10.68□□□□□ -0.7
Chd8Q09XV5 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chd8Q09XV5 Gm37582-201ENSMUST00000192953 1409 ntBASIC10.68□□□□□ -0.7
Chd8Q09XV5 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Chd8Q09XV5 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Chd8Q09XV5 Gm13002-201ENSMUST00000119286 682 ntBASIC10.68□□□□□ -0.7
Chd8Q09XV5 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Chd8Q09XV5 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
Chd8Q09XV5 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC10.68□□□□□ -0.7
Chd8Q09XV5 Gm9372-201ENSMUST00000168454 430 ntBASIC10.68□□□□□ -0.7
Chd8Q09XV5 Gm4310-201ENSMUST00000177847 889 ntBASIC10.68□□□□□ -0.7
Chd8Q09XV5 Gm37819-201ENSMUST00000194626 1065 ntBASIC10.68□□□□□ -0.7
Chd8Q09XV5 Gm42588-201ENSMUST00000200538 1297 ntBASIC10.68□□□□□ -0.7
Chd8Q09XV5 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Chd8Q09XV5 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Chd8Q09XV5 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Chd8Q09XV5 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Chd8Q09XV5 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chd8Q09XV5 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chd8Q09XV5 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chd8Q09XV5 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Chd8Q09XV5 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Chd8Q09XV5 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chd8Q09XV5 Rab38-201ENSMUST00000107256 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chd8Q09XV5 Parva-201ENSMUST00000033030 4454 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chd8Q09XV5 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Chd8Q09XV5 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chd8Q09XV5 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC10.68□□□□□ -0.7
Chd8Q09XV5 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chd8Q09XV5 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.68□□□□□ -0.7
Chd8Q09XV5 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Chd8Q09XV5 Gm12037-201ENSMUST00000123160 308 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Chd8Q09XV5 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC10.68□□□□□ -0.7
Chd8Q09XV5 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Chd8Q09XV5 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC10.68□□□□□ -0.7
Chd8Q09XV5 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Chd8Q09XV5 Gm23458-201ENSMUST00000083257 169 ntBASIC10.68□□□□□ -0.7
Chd8Q09XV5 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chd8Q09XV5 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Gm42872-201ENSMUST00000200026 1967 ntBASIC10.67□□□□□ -0.7
Chd8Q09XV5 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Gm13394-201ENSMUST00000121658 1000 ntBASIC10.67□□□□□ -0.7
Chd8Q09XV5 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Gm5808-201ENSMUST00000178090 357 ntBASIC10.67□□□□□ -0.7
Chd8Q09XV5 Ppp1r2-ps1-201ENSMUST00000178232 621 ntBASIC10.67□□□□□ -0.7
Chd8Q09XV5 Ppp1r2-ps6-201ENSMUST00000179333 621 ntBASIC10.67□□□□□ -0.7
Chd8Q09XV5 Gm42617-201ENSMUST00000197640 1229 ntBASIC10.67□□□□□ -0.7
Chd8Q09XV5 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC10.67□□□□□ -0.7
Chd8Q09XV5 CU025215.1-201ENSMUST00000222986 603 ntBASIC10.67□□□□□ -0.7
Chd8Q09XV5 Smok4a-201ENSMUST00000074512 1455 ntBASIC10.67□□□□□ -0.7
Chd8Q09XV5 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Gm1826-201ENSMUST00000118646 1162 ntBASIC10.67□□□□□ -0.7
Chd8Q09XV5 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Gm6881-201ENSMUST00000121811 833 ntBASIC10.67□□□□□ -0.7
Chd8Q09XV5 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Ccpg1os-201ENSMUST00000124565 711 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chd8Q09XV5 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms