Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1bP61025 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Cks1bP61025 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Cks1bP61025 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Carhsp1-201ENSMUST00000008537 2849 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Cks1bP61025 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC8.59□□□□□ -1.03
Cks1bP61025 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
Cks1bP61025 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC8.59□□□□□ -1.03
Cks1bP61025 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Gm21854-201ENSMUST00000179901 471 ntBASIC8.59□□□□□ -1.03
Cks1bP61025 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Gm5354-201ENSMUST00000182417 973 ntBASIC8.59□□□□□ -1.03
Cks1bP61025 Mir8102-201ENSMUST00000184148 139 ntBASIC8.59□□□□□ -1.03
Cks1bP61025 Gm37935-201ENSMUST00000192012 982 ntBASIC8.59□□□□□ -1.03
Cks1bP61025 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC8.59□□□□□ -1.03
Cks1bP61025 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Cks1bP61025 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC8.59□□□□□ -1.03
Cks1bP61025 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Traf1-207ENSMUST00000172159 3436 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Cks1bP61025 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC8.59□□□□□ -1.03
Cks1bP61025 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cks1bP61025 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.04
Cks1bP61025 Acss3-203ENSMUST00000165067 4696 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.04
Cks1bP61025 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC8.59□□□□□ -1.04
Cks1bP61025 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cks1bP61025 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC8.58□□□□□ -1.04
Cks1bP61025 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC8.58□□□□□ -1.04
Cks1bP61025 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cks1bP61025 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cks1bP61025 Gm6210-201ENSMUST00000204734 1942 ntBASIC8.58□□□□□ -1.04
Cks1bP61025 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cks1bP61025 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Cks1bP61025 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cks1bP61025 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cks1bP61025 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cks1bP61025 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cks1bP61025 Gm42826-201ENSMUST00000197548 2639 ntBASIC8.58□□□□□ -1.04
Cks1bP61025 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Cks1bP61025 Zcchc12-202ENSMUST00000115256 2197 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
Cks1bP61025 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Cks1bP61025 Grb10-202ENSMUST00000109653 2048 ntTSL 5 BASIC8.58□□□□□ -1.04
Cks1bP61025 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cks1bP61025 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Cks1bP61025 Robo4-202ENSMUST00000115046 3878 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
Cks1bP61025 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cks1bP61025 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cks1bP61025 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cks1bP61025 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cks1bP61025 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cks1bP61025 Gm45161-201ENSMUST00000207316 2263 ntBASIC8.58□□□□□ -1.04
Cks1bP61025 Gm23935-201ENSMUST00000102303 57 ntBASIC8.58□□□□□ -1.04
Cks1bP61025 Gm24270-201ENSMUST00000102326 57 ntBASIC8.58□□□□□ -1.04
Cks1bP61025 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Cks1bP61025 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC8.58□□□□□ -1.04
Cks1bP61025 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Cks1bP61025 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cks1bP61025 Gm24245-201ENSMUST00000157318 57 ntBASIC8.58□□□□□ -1.04
Cks1bP61025 Mir7684-201ENSMUST00000183858 60 ntBASIC8.58□□□□□ -1.04
Cks1bP61025 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC8.58□□□□□ -1.04
Cks1bP61025 Ighv8-10-201ENSMUST00000199579 358 ntBASIC8.58□□□□□ -1.04
Cks1bP61025 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC8.58□□□□□ -1.04
Cks1bP61025 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC8.58□□□□□ -1.04
Cks1bP61025 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC8.58□□□□□ -1.04
Cks1bP61025 Gm19220-201ENSMUST00000222682 803 ntBASIC8.58□□□□□ -1.04
Cks1bP61025 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms