Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
XPAP23025 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.27■□□□□ 0.04
XPAP23025 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.27■□□□□ 0.04
XPAP23025 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
XPAP23025 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
XPAP23025 ANKRD19P-201ENST00000338192 862 ntBASIC15.27■□□□□ 0.04
XPAP23025 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.27■□□□□ 0.04
XPAP23025 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.27■□□□□ 0.04
XPAP23025 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.27■□□□□ 0.04
XPAP23025 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.27■□□□□ 0.04
XPAP23025 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
XPAP23025 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.27■□□□□ 0.04
XPAP23025 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.27■□□□□ 0.04
XPAP23025 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
XPAP23025 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
XPAP23025 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.27■□□□□ 0.04
XPAP23025 RNA5SP486-201ENST00000515961 83 ntBASIC15.27■□□□□ 0.04
XPAP23025 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
XPAP23025 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
XPAP23025 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.27■□□□□ 0.04
XPAP23025 RN7SL48P-201ENST00000579283 293 ntBASIC15.27■□□□□ 0.04
XPAP23025 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
XPAP23025 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.27■□□□□ 0.04
XPAP23025 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.27■□□□□ 0.04
XPAP23025 AL138709.1-201ENST00000614840 1693 ntBASIC15.27■□□□□ 0.03
XPAP23025 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
XPAP23025 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
XPAP23025 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.27■□□□□ 0.03
XPAP23025 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
XPAP23025 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
XPAP23025 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
XPAP23025 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
XPAP23025 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.27■□□□□ 0.03
XPAP23025 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.27■□□□□ 0.03
XPAP23025 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
XPAP23025 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.27■□□□□ 0.03
XPAP23025 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
XPAP23025 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
XPAP23025 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
XPAP23025 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
XPAP23025 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.27■□□□□ 0.03
XPAP23025 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
XPAP23025 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
XPAP23025 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
XPAP23025 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
XPAP23025 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.26■□□□□ 0.03
XPAP23025 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
XPAP23025 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
XPAP23025 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
XPAP23025 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
XPAP23025 WASH3P-207ENST00000560956 1394 ntBASIC15.26■□□□□ 0.03
XPAP23025 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
XPAP23025 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.26■□□□□ 0.03
XPAP23025 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
XPAP23025 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.26■□□□□ 0.03
XPAP23025 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
XPAP23025 AL157414.3-201ENST00000624276 1954 ntBASIC15.26■□□□□ 0.03
XPAP23025 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
XPAP23025 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
XPAP23025 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
XPAP23025 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.26■□□□□ 0.03
XPAP23025 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
XPAP23025 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.26■□□□□ 0.03
XPAP23025 FAM21FP-201ENST00000426241 1131 ntBASIC15.26■□□□□ 0.03
XPAP23025 HLA-V-201ENST00000429037 534 ntBASIC15.26■□□□□ 0.03
XPAP23025 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
XPAP23025 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
XPAP23025 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.26■□□□□ 0.03
XPAP23025 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
XPAP23025 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
XPAP23025 AC023310.1-201ENST00000554836 735 ntBASIC15.26■□□□□ 0.03
XPAP23025 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.26■□□□□ 0.03
XPAP23025 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.26■□□□□ 0.03
XPAP23025 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.26■□□□□ 0.03
XPAP23025 ENPP7P14-201ENST00000621765 1040 ntBASIC15.26■□□□□ 0.03
XPAP23025 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.26■□□□□ 0.03
XPAP23025 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
XPAP23025 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
XPAP23025 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.26■□□□□ 0.03
XPAP23025 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
XPAP23025 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
XPAP23025 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
XPAP23025 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
XPAP23025 AL354989.2-201ENST00000435838 1540 ntBASIC15.26■□□□□ 0.03
XPAP23025 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.26■□□□□ 0.03
XPAP23025 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
XPAP23025 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
XPAP23025 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.26■□□□□ 0.03
XPAP23025 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
XPAP23025 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
XPAP23025 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
XPAP23025 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.26■□□□□ 0.03
XPAP23025 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
XPAP23025 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC15.26■□□□□ 0.03
XPAP23025 AL359258.3-201ENST00000622910 2331 ntBASIC15.26■□□□□ 0.03
XPAP23025 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.26■□□□□ 0.03
XPAP23025 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
XPAP23025 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
XPAP23025 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
XPAP23025 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms