Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Gm8459-201ENSMUST00000162504 760 ntBASIC13.19□□□□□ -0.3
Trdmt1O55055 Gm9192-201ENSMUST00000183221 985 ntBASIC13.19□□□□□ -0.3
Trdmt1O55055 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trdmt1O55055 Gm28937-201ENSMUST00000185413 695 ntBASIC13.19□□□□□ -0.3
Trdmt1O55055 Gm29400-201ENSMUST00000187208 695 ntBASIC13.19□□□□□ -0.3
Trdmt1O55055 Gm28662-201ENSMUST00000188446 695 ntBASIC13.19□□□□□ -0.3
Trdmt1O55055 Gm28251-201ENSMUST00000188835 695 ntBASIC13.19□□□□□ -0.3
Trdmt1O55055 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC13.19□□□□□ -0.3
Trdmt1O55055 Gm9136-201ENSMUST00000193368 454 ntBASIC13.19□□□□□ -0.3
Trdmt1O55055 Gm37318-201ENSMUST00000194325 695 ntBASIC13.19□□□□□ -0.3
Trdmt1O55055 Gm38017-201ENSMUST00000194768 695 ntBASIC13.19□□□□□ -0.3
Trdmt1O55055 Gm37287-201ENSMUST00000195449 695 ntBASIC13.19□□□□□ -0.3
Trdmt1O55055 Gm37793-201ENSMUST00000195548 695 ntBASIC13.19□□□□□ -0.3
Trdmt1O55055 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trdmt1O55055 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC13.19□□□□□ -0.3
Trdmt1O55055 Gm8342-201ENSMUST00000209839 757 ntBASIC13.19□□□□□ -0.3
Trdmt1O55055 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trdmt1O55055 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC13.19□□□□□ -0.3
Trdmt1O55055 Gm19009-201ENSMUST00000223072 823 ntBASIC13.19□□□□□ -0.3
Trdmt1O55055 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trdmt1O55055 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trdmt1O55055 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trdmt1O55055 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trdmt1O55055 Olfr584-201ENSMUST00000098210 964 ntBASIC13.19□□□□□ -0.3
Trdmt1O55055 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trdmt1O55055 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trdmt1O55055 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.19□□□□□ -0.3
Trdmt1O55055 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trdmt1O55055 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trdmt1O55055 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trdmt1O55055 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Trdmt1O55055 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trdmt1O55055 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trdmt1O55055 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trdmt1O55055 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trdmt1O55055 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trdmt1O55055 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trdmt1O55055 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdmt1O55055 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdmt1O55055 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdmt1O55055 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdmt1O55055 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdmt1O55055 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trdmt1O55055 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.18□□□□□ -0.3
Trdmt1O55055 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trdmt1O55055 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC13.18□□□□□ -0.3
Trdmt1O55055 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdmt1O55055 Gm3671-201ENSMUST00000182463 1007 ntBASIC13.18□□□□□ -0.3
Trdmt1O55055 Gm8531-201ENSMUST00000188319 893 ntBASIC13.18□□□□□ -0.3
Trdmt1O55055 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC13.18□□□□□ -0.3
Trdmt1O55055 Gm37981-201ENSMUST00000194280 535 ntBASIC13.18□□□□□ -0.3
Trdmt1O55055 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trdmt1O55055 Gm19091-201ENSMUST00000208120 978 ntBASIC13.18□□□□□ -0.3
Trdmt1O55055 AC153929.1-201ENSMUST00000219009 303 ntBASIC13.18□□□□□ -0.3
Trdmt1O55055 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC13.18□□□□□ -0.3
Trdmt1O55055 AC174797.2-202ENSMUST00000225729 568 ntBASIC13.18□□□□□ -0.3
Trdmt1O55055 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdmt1O55055 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdmt1O55055 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdmt1O55055 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trdmt1O55055 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdmt1O55055 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.18□□□□□ -0.3
Trdmt1O55055 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Trdmt1O55055 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdmt1O55055 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Trdmt1O55055 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trdmt1O55055 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdmt1O55055 Map1b-203ENSMUST00000223725 2669 ntBASIC13.17□□□□□ -0.3
Trdmt1O55055 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdmt1O55055 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdmt1O55055 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdmt1O55055 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Trdmt1O55055 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdmt1O55055 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdmt1O55055 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trdmt1O55055 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdmt1O55055 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
Trdmt1O55055 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Trdmt1O55055 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trdmt1O55055 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdmt1O55055 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC13.17□□□□□ -0.3
Trdmt1O55055 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC13.17□□□□□ -0.3
Trdmt1O55055 Gm13668-201ENSMUST00000119237 1001 ntBASIC13.17□□□□□ -0.3
Trdmt1O55055 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC13.17□□□□□ -0.3
Trdmt1O55055 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC13.17□□□□□ -0.3
Trdmt1O55055 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC13.17□□□□□ -0.3
Trdmt1O55055 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdmt1O55055 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdmt1O55055 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trdmt1O55055 Gm19166-201ENSMUST00000196041 1063 ntBASIC13.17□□□□□ -0.3
Trdmt1O55055 Gm8574-201ENSMUST00000203207 924 ntBASIC13.17□□□□□ -0.3
Trdmt1O55055 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC13.17□□□□□ -0.3
Trdmt1O55055 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdmt1O55055 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trdmt1O55055 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdmt1O55055 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdmt1O55055 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trdmt1O55055 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC13.17□□□□□ -0.3
Trdmt1O55055 Gm5451-201ENSMUST00000080545 579 ntBASIC13.17□□□□□ -0.3
Trdmt1O55055 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms