Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn2Q9R0A1 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn2Q9R0A1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn2Q9R0A1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn2Q9R0A1 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Clcn2Q9R0A1 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn2Q9R0A1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn2Q9R0A1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn2Q9R0A1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Clcn2Q9R0A1 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn2Q9R0A1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.05■□□□□ 0.96
Clcn2Q9R0A1 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clcn2Q9R0A1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clcn2Q9R0A1 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clcn2Q9R0A1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Clcn2Q9R0A1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
Clcn2Q9R0A1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clcn2Q9R0A1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn2Q9R0A1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn2Q9R0A1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Clcn2Q9R0A1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn2Q9R0A1 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn2Q9R0A1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Clcn2Q9R0A1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Clcn2Q9R0A1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn2Q9R0A1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Clcn2Q9R0A1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Clcn2Q9R0A1 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
Clcn2Q9R0A1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Clcn2Q9R0A1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Clcn2Q9R0A1 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.03■□□□□ 0.96
Clcn2Q9R0A1 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Clcn2Q9R0A1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Clcn2Q9R0A1 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Clcn2Q9R0A1 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Clcn2Q9R0A1 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clcn2Q9R0A1 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.02■□□□□ 0.96
Clcn2Q9R0A1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clcn2Q9R0A1 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Clcn2Q9R0A1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Clcn2Q9R0A1 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.02■□□□□ 0.96
Clcn2Q9R0A1 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clcn2Q9R0A1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Clcn2Q9R0A1 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Clcn2Q9R0A1 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.01■□□□□ 0.95
Clcn2Q9R0A1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clcn2Q9R0A1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Clcn2Q9R0A1 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clcn2Q9R0A1 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Clcn2Q9R0A1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Clcn2Q9R0A1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clcn2Q9R0A1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clcn2Q9R0A1 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clcn2Q9R0A1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Clcn2Q9R0A1 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21■□□□□ 0.95
Clcn2Q9R0A1 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Clcn2Q9R0A1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clcn2Q9R0A1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21■□□□□ 0.95
Clcn2Q9R0A1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clcn2Q9R0A1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21■□□□□ 0.95
Clcn2Q9R0A1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21■□□□□ 0.95
Clcn2Q9R0A1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Clcn2Q9R0A1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clcn2Q9R0A1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.99■□□□□ 0.95
Clcn2Q9R0A1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clcn2Q9R0A1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Clcn2Q9R0A1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
Clcn2Q9R0A1 Gm15546-201ENSMUST00000122095 826 ntBASIC20.99■□□□□ 0.95
Clcn2Q9R0A1 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clcn2Q9R0A1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clcn2Q9R0A1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clcn2Q9R0A1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clcn2Q9R0A1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clcn2Q9R0A1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.98■□□□□ 0.95
Clcn2Q9R0A1 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Clcn2Q9R0A1 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clcn2Q9R0A1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clcn2Q9R0A1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clcn2Q9R0A1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clcn2Q9R0A1 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clcn2Q9R0A1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clcn2Q9R0A1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clcn2Q9R0A1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Clcn2Q9R0A1 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Clcn2Q9R0A1 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.97■□□□□ 0.95
Clcn2Q9R0A1 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clcn2Q9R0A1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clcn2Q9R0A1 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clcn2Q9R0A1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clcn2Q9R0A1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Clcn2Q9R0A1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clcn2Q9R0A1 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.96■□□□□ 0.95
Clcn2Q9R0A1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Clcn2Q9R0A1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Clcn2Q9R0A1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clcn2Q9R0A1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Clcn2Q9R0A1 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clcn2Q9R0A1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clcn2Q9R0A1 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clcn2Q9R0A1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms