Protein–RNA interactions for Protein: Q9QX15

Clca3a1, Calcium-activated chloride channel regulator 3A-1, mousemouse

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3a1Q9QX15 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clca3a1Q9QX15 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clca3a1Q9QX15 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clca3a1Q9QX15 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clca3a1Q9QX15 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clca3a1Q9QX15 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clca3a1Q9QX15 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clca3a1Q9QX15 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Clca3a1Q9QX15 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Clca3a1Q9QX15 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clca3a1Q9QX15 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clca3a1Q9QX15 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clca3a1Q9QX15 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clca3a1Q9QX15 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Clca3a1Q9QX15 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.41■□□□□ 0.7
Clca3a1Q9QX15 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clca3a1Q9QX15 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clca3a1Q9QX15 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clca3a1Q9QX15 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Clca3a1Q9QX15 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clca3a1Q9QX15 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clca3a1Q9QX15 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.4■□□□□ 0.7
Clca3a1Q9QX15 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clca3a1Q9QX15 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.4■□□□□ 0.7
Clca3a1Q9QX15 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clca3a1Q9QX15 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clca3a1Q9QX15 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clca3a1Q9QX15 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Clca3a1Q9QX15 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clca3a1Q9QX15 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.39■□□□□ 0.7
Clca3a1Q9QX15 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clca3a1Q9QX15 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.39■□□□□ 0.69
Clca3a1Q9QX15 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clca3a1Q9QX15 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clca3a1Q9QX15 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Clca3a1Q9QX15 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.39■□□□□ 0.69
Clca3a1Q9QX15 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Clca3a1Q9QX15 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clca3a1Q9QX15 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clca3a1Q9QX15 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clca3a1Q9QX15 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clca3a1Q9QX15 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.39■□□□□ 0.69
Clca3a1Q9QX15 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Clca3a1Q9QX15 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clca3a1Q9QX15 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Clca3a1Q9QX15 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clca3a1Q9QX15 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Clca3a1Q9QX15 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clca3a1Q9QX15 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Clca3a1Q9QX15 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Clca3a1Q9QX15 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Clca3a1Q9QX15 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Clca3a1Q9QX15 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clca3a1Q9QX15 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clca3a1Q9QX15 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Clca3a1Q9QX15 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clca3a1Q9QX15 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clca3a1Q9QX15 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.37■□□□□ 0.69
Clca3a1Q9QX15 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clca3a1Q9QX15 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clca3a1Q9QX15 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Clca3a1Q9QX15 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clca3a1Q9QX15 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clca3a1Q9QX15 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.37■□□□□ 0.69
Clca3a1Q9QX15 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clca3a1Q9QX15 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clca3a1Q9QX15 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clca3a1Q9QX15 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clca3a1Q9QX15 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Clca3a1Q9QX15 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clca3a1Q9QX15 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clca3a1Q9QX15 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clca3a1Q9QX15 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clca3a1Q9QX15 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.36■□□□□ 0.69
Clca3a1Q9QX15 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Clca3a1Q9QX15 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clca3a1Q9QX15 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clca3a1Q9QX15 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clca3a1Q9QX15 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.35■□□□□ 0.69
Clca3a1Q9QX15 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clca3a1Q9QX15 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clca3a1Q9QX15 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clca3a1Q9QX15 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clca3a1Q9QX15 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clca3a1Q9QX15 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clca3a1Q9QX15 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.34■□□□□ 0.69
Clca3a1Q9QX15 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clca3a1Q9QX15 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.33■□□□□ 0.69
Clca3a1Q9QX15 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.33■□□□□ 0.68
Clca3a1Q9QX15 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Clca3a1Q9QX15 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clca3a1Q9QX15 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.33■□□□□ 0.68
Clca3a1Q9QX15 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.33■□□□□ 0.68
Clca3a1Q9QX15 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Clca3a1Q9QX15 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Clca3a1Q9QX15 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clca3a1Q9QX15 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clca3a1Q9QX15 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clca3a1Q9QX15 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clca3a1Q9QX15 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms