Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prg4Q9JM99 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prg4Q9JM99 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prg4Q9JM99 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prg4Q9JM99 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Prg4Q9JM99 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prg4Q9JM99 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prg4Q9JM99 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.89■□□□□ 0.61
Prg4Q9JM99 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prg4Q9JM99 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prg4Q9JM99 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.89■□□□□ 0.61
Prg4Q9JM99 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.89■□□□□ 0.61
Prg4Q9JM99 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Prg4Q9JM99 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prg4Q9JM99 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Prg4Q9JM99 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prg4Q9JM99 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prg4Q9JM99 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prg4Q9JM99 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.88■□□□□ 0.61
Prg4Q9JM99 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Prg4Q9JM99 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prg4Q9JM99 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prg4Q9JM99 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.87■□□□□ 0.61
Prg4Q9JM99 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prg4Q9JM99 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.87■□□□□ 0.61
Prg4Q9JM99 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Prg4Q9JM99 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prg4Q9JM99 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Prg4Q9JM99 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Prg4Q9JM99 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prg4Q9JM99 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.86■□□□□ 0.61
Prg4Q9JM99 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prg4Q9JM99 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.86■□□□□ 0.61
Prg4Q9JM99 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Prg4Q9JM99 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Prg4Q9JM99 Gm21956-201ENSMUST00000179946 522 ntBASIC18.86■□□□□ 0.61
Prg4Q9JM99 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.86■□□□□ 0.61
Prg4Q9JM99 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prg4Q9JM99 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prg4Q9JM99 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Prg4Q9JM99 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Prg4Q9JM99 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Prg4Q9JM99 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.85■□□□□ 0.61
Prg4Q9JM99 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.85■□□□□ 0.61
Prg4Q9JM99 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Prg4Q9JM99 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Prg4Q9JM99 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prg4Q9JM99 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prg4Q9JM99 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prg4Q9JM99 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prg4Q9JM99 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prg4Q9JM99 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prg4Q9JM99 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prg4Q9JM99 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prg4Q9JM99 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prg4Q9JM99 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prg4Q9JM99 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Prg4Q9JM99 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prg4Q9JM99 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Prg4Q9JM99 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Prg4Q9JM99 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
Prg4Q9JM99 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Prg4Q9JM99 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Prg4Q9JM99 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Prg4Q9JM99 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prg4Q9JM99 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.83■□□□□ 0.6
Prg4Q9JM99 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.83■□□□□ 0.6
Prg4Q9JM99 Gm43530-201ENSMUST00000195920 274 ntBASIC18.83■□□□□ 0.6
Prg4Q9JM99 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.83■□□□□ 0.6
Prg4Q9JM99 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.83■□□□□ 0.6
Prg4Q9JM99 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prg4Q9JM99 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.82■□□□□ 0.6
Prg4Q9JM99 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Prg4Q9JM99 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prg4Q9JM99 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Prg4Q9JM99 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Prg4Q9JM99 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Prg4Q9JM99 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.82■□□□□ 0.6
Prg4Q9JM99 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prg4Q9JM99 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prg4Q9JM99 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prg4Q9JM99 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Prg4Q9JM99 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prg4Q9JM99 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prg4Q9JM99 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prg4Q9JM99 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prg4Q9JM99 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prg4Q9JM99 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prg4Q9JM99 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prg4Q9JM99 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prg4Q9JM99 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prg4Q9JM99 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prg4Q9JM99 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prg4Q9JM99 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prg4Q9JM99 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prg4Q9JM99 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prg4Q9JM99 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prg4Q9JM99 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prg4Q9JM99 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prg4Q9JM99 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms