Protein–RNA interactions for Protein: Q9H9D4

ZNF408, Zinc finger protein 408, humanhuman

Predictions only

Length 720 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF408Q9H9D4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC27.37■■□□□ 1.97
ZNF408Q9H9D4 DUX4L6-201ENST00000626483 1275 ntBASIC27.37■■□□□ 1.97
ZNF408Q9H9D4 DUX4L1-201ENST00000627662 1275 ntBASIC27.37■■□□□ 1.97
ZNF408Q9H9D4 DUX4L8-201ENST00000629013 1275 ntBASIC27.37■■□□□ 1.97
ZNF408Q9H9D4 DUX4L3-201ENST00000630187 1275 ntBASIC27.37■■□□□ 1.97
ZNF408Q9H9D4 DUX4L7-201ENST00000630678 1275 ntBASIC27.37■■□□□ 1.97
ZNF408Q9H9D4 DUX4L5-201ENST00000630834 1275 ntBASIC27.37■■□□□ 1.97
ZNF408Q9H9D4 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ZNF408Q9H9D4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC27.37■■□□□ 1.97
ZNF408Q9H9D4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC27.37■■□□□ 1.97
ZNF408Q9H9D4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
ZNF408Q9H9D4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
ZNF408Q9H9D4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
ZNF408Q9H9D4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
ZNF408Q9H9D4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC27.36■■□□□ 1.97
ZNF408Q9H9D4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC27.36■■□□□ 1.97
ZNF408Q9H9D4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC27.36■■□□□ 1.97
ZNF408Q9H9D4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC27.36■■□□□ 1.97
ZNF408Q9H9D4 MPST-208ENST00000628507 698 ntTSL 5 BASIC27.36■■□□□ 1.97
ZNF408Q9H9D4 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
ZNF408Q9H9D4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
ZNF408Q9H9D4 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
ZNF408Q9H9D4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
ZNF408Q9H9D4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
ZNF408Q9H9D4 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
ZNF408Q9H9D4 AC009102.2-201ENST00000606772 1639 ntBASIC27.35■■□□□ 1.97
ZNF408Q9H9D4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
ZNF408Q9H9D4 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC27.35■■□□□ 1.97
ZNF408Q9H9D4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ZNF408Q9H9D4 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
ZNF408Q9H9D4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
ZNF408Q9H9D4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ZNF408Q9H9D4 BX842568.3-201ENST00000418104 571 ntBASIC27.34■■□□□ 1.97
ZNF408Q9H9D4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
ZNF408Q9H9D4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC27.34■■□□□ 1.97
ZNF408Q9H9D4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ZNF408Q9H9D4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ZNF408Q9H9D4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC27.33■■□□□ 1.97
ZNF408Q9H9D4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ZNF408Q9H9D4 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ZNF408Q9H9D4 NME4-202ENST00000382940 766 ntTSL 3 BASIC27.33■■□□□ 1.97
ZNF408Q9H9D4 AC006455.2-201ENST00000429931 906 ntBASIC27.33■■□□□ 1.97
ZNF408Q9H9D4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
ZNF408Q9H9D4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC27.33■■□□□ 1.97
ZNF408Q9H9D4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ZNF408Q9H9D4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
ZNF408Q9H9D4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC27.33■■□□□ 1.97
ZNF408Q9H9D4 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ZNF408Q9H9D4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC27.32■■□□□ 1.96
ZNF408Q9H9D4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
ZNF408Q9H9D4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ZNF408Q9H9D4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC27.32■■□□□ 1.96
ZNF408Q9H9D4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC27.32■■□□□ 1.96
ZNF408Q9H9D4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ZNF408Q9H9D4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
ZNF408Q9H9D4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC27.32■■□□□ 1.96
ZNF408Q9H9D4 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ZNF408Q9H9D4 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
ZNF408Q9H9D4 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
ZNF408Q9H9D4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
ZNF408Q9H9D4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
ZNF408Q9H9D4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC27.31■■□□□ 1.96
ZNF408Q9H9D4 AC126544.1-201ENST00000580842 1059 ntBASIC27.31■■□□□ 1.96
ZNF408Q9H9D4 AC245100.8-202ENST00000629247 1058 ntBASIC27.31■■□□□ 1.96
ZNF408Q9H9D4 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
ZNF408Q9H9D4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
ZNF408Q9H9D4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC27.31■■□□□ 1.96
ZNF408Q9H9D4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC27.31■■□□□ 1.96
ZNF408Q9H9D4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
ZNF408Q9H9D4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC27.3■■□□□ 1.96
ZNF408Q9H9D4 GXYLT1P2-201ENST00000433312 1230 ntBASIC27.3■■□□□ 1.96
ZNF408Q9H9D4 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC27.3■■□□□ 1.96
ZNF408Q9H9D4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
ZNF408Q9H9D4 ST7-205ENST00000393446 2114 ntTSL 5 BASIC27.29■■□□□ 1.96
ZNF408Q9H9D4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC27.29■■□□□ 1.96
ZNF408Q9H9D4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC27.29■■□□□ 1.96
ZNF408Q9H9D4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC27.29■■□□□ 1.96
ZNF408Q9H9D4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
ZNF408Q9H9D4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
ZNF408Q9H9D4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC27.29■■□□□ 1.96
ZNF408Q9H9D4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
ZNF408Q9H9D4 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
ZNF408Q9H9D4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
ZNF408Q9H9D4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
ZNF408Q9H9D4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC27.28■■□□□ 1.96
ZNF408Q9H9D4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
ZNF408Q9H9D4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
ZNF408Q9H9D4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC27.28■■□□□ 1.96
ZNF408Q9H9D4 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC27.28■■□□□ 1.96
ZNF408Q9H9D4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
ZNF408Q9H9D4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
ZNF408Q9H9D4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
ZNF408Q9H9D4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC27.27■■□□□ 1.96
ZNF408Q9H9D4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC27.27■■□□□ 1.96
ZNF408Q9H9D4 AC241377.3-202ENST00000626088 1088 ntBASIC27.26■■□□□ 1.95
ZNF408Q9H9D4 AC241585.3-202ENST00000628937 1088 ntBASIC27.26■■□□□ 1.95
ZNF408Q9H9D4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC27.26■■□□□ 1.95
ZNF408Q9H9D4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC27.26■■□□□ 1.95
ZNF408Q9H9D4 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
ZNF408Q9H9D4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms