Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhb5Q91XZ5 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC24.53■■□□□ 1.52
Pcdhb5Q91XZ5 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhb5Q91XZ5 Gm5576-201ENSMUST00000075809 1236 ntBASIC24.53■■□□□ 1.52
Pcdhb5Q91XZ5 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhb5Q91XZ5 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhb5Q91XZ5 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhb5Q91XZ5 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Pcdhb5Q91XZ5 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC24.52■■□□□ 1.52
Pcdhb5Q91XZ5 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC24.51■■□□□ 1.51
Pcdhb5Q91XZ5 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdhb5Q91XZ5 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdhb5Q91XZ5 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdhb5Q91XZ5 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC24.51■■□□□ 1.51
Pcdhb5Q91XZ5 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdhb5Q91XZ5 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdhb5Q91XZ5 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC24.5■■□□□ 1.51
Pcdhb5Q91XZ5 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdhb5Q91XZ5 Gm8493-201ENSMUST00000196881 489 ntBASIC24.5■■□□□ 1.51
Pcdhb5Q91XZ5 Gm43017-201ENSMUST00000198296 752 ntBASIC24.5■■□□□ 1.51
Pcdhb5Q91XZ5 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdhb5Q91XZ5 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdhb5Q91XZ5 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdhb5Q91XZ5 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdhb5Q91XZ5 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
Pcdhb5Q91XZ5 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Pcdhb5Q91XZ5 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
Pcdhb5Q91XZ5 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdhb5Q91XZ5 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdhb5Q91XZ5 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
Pcdhb5Q91XZ5 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdhb5Q91XZ5 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC24.48■■□□□ 1.51
Pcdhb5Q91XZ5 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdhb5Q91XZ5 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdhb5Q91XZ5 Gm21168-201ENSMUST00000199646 1096 ntBASIC24.48■■□□□ 1.51
Pcdhb5Q91XZ5 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdhb5Q91XZ5 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdhb5Q91XZ5 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC24.47■■□□□ 1.51
Pcdhb5Q91XZ5 Flvcr1-202ENSMUST00000191946 1216 ntBASIC24.47■■□□□ 1.51
Pcdhb5Q91XZ5 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdhb5Q91XZ5 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC24.47■■□□□ 1.51
Pcdhb5Q91XZ5 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC24.47■■□□□ 1.51
Pcdhb5Q91XZ5 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdhb5Q91XZ5 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdhb5Q91XZ5 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdhb5Q91XZ5 AC153962.1-201ENSMUST00000218530 1948 ntBASIC24.46■■□□□ 1.51
Pcdhb5Q91XZ5 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC24.46■■□□□ 1.51
Pcdhb5Q91XZ5 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC24.46■■□□□ 1.51
Pcdhb5Q91XZ5 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdhb5Q91XZ5 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdhb5Q91XZ5 Gm8495-201ENSMUST00000188740 694 ntBASIC24.46■■□□□ 1.51
Pcdhb5Q91XZ5 Wdr70-203ENSMUST00000227371 1130 ntBASIC24.46■■□□□ 1.51
Pcdhb5Q91XZ5 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdhb5Q91XZ5 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdhb5Q91XZ5 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
Pcdhb5Q91XZ5 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdhb5Q91XZ5 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Pcdhb5Q91XZ5 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC24.45■■□□□ 1.5
Pcdhb5Q91XZ5 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Pcdhb5Q91XZ5 Gm18284-201ENSMUST00000172604 624 ntBASIC24.45■■□□□ 1.5
Pcdhb5Q91XZ5 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Pcdhb5Q91XZ5 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdhb5Q91XZ5 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Pcdhb5Q91XZ5 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdhb5Q91XZ5 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdhb5Q91XZ5 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdhb5Q91XZ5 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdhb5Q91XZ5 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdhb5Q91XZ5 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdhb5Q91XZ5 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdhb5Q91XZ5 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdhb5Q91XZ5 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdhb5Q91XZ5 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdhb5Q91XZ5 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdhb5Q91XZ5 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdhb5Q91XZ5 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC24.43■■□□□ 1.5
Pcdhb5Q91XZ5 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdhb5Q91XZ5 Gm43530-201ENSMUST00000195920 274 ntBASIC24.43■■□□□ 1.5
Pcdhb5Q91XZ5 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
Pcdhb5Q91XZ5 AC164883.3-201ENSMUST00000227396 1774 ntBASIC24.43■■□□□ 1.5
Pcdhb5Q91XZ5 AC166356.1-201ENSMUST00000228236 1426 ntBASIC24.43■■□□□ 1.5
Pcdhb5Q91XZ5 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC24.43■■□□□ 1.5
Pcdhb5Q91XZ5 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdhb5Q91XZ5 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdhb5Q91XZ5 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdhb5Q91XZ5 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Pcdhb5Q91XZ5 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC24.42■■□□□ 1.5
Pcdhb5Q91XZ5 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdhb5Q91XZ5 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdhb5Q91XZ5 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdhb5Q91XZ5 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdhb5Q91XZ5 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdhb5Q91XZ5 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdhb5Q91XZ5 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdhb5Q91XZ5 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdhb5Q91XZ5 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdhb5Q91XZ5 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Pcdhb5Q91XZ5 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdhb5Q91XZ5 Gm42418-201ENSMUST00000182010 1831 ntBASIC24.4■■□□□ 1.5
Pcdhb5Q91XZ5 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC24.4■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms