Protein–RNA interactions for Protein: Q8VH37

Hdac8, Histone deacetylase 8, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac8Q8VH37 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac8Q8VH37 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac8Q8VH37 Gm27454-201ENSMUST00000185090 204 ntBASIC20.29■□□□□ 0.84
Hdac8Q8VH37 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac8Q8VH37 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac8Q8VH37 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac8Q8VH37 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac8Q8VH37 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac8Q8VH37 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac8Q8VH37 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac8Q8VH37 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac8Q8VH37 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac8Q8VH37 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac8Q8VH37 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac8Q8VH37 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac8Q8VH37 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.28■□□□□ 0.84
Hdac8Q8VH37 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Hdac8Q8VH37 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.27■□□□□ 0.84
Hdac8Q8VH37 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.27■□□□□ 0.84
Hdac8Q8VH37 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hdac8Q8VH37 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Hdac8Q8VH37 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Hdac8Q8VH37 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac8Q8VH37 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac8Q8VH37 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac8Q8VH37 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac8Q8VH37 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac8Q8VH37 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac8Q8VH37 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac8Q8VH37 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac8Q8VH37 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac8Q8VH37 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac8Q8VH37 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.25■□□□□ 0.83
Hdac8Q8VH37 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hdac8Q8VH37 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hdac8Q8VH37 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hdac8Q8VH37 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hdac8Q8VH37 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hdac8Q8VH37 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hdac8Q8VH37 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hdac8Q8VH37 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.24■□□□□ 0.83
Hdac8Q8VH37 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hdac8Q8VH37 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.24■□□□□ 0.83
Hdac8Q8VH37 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hdac8Q8VH37 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.24■□□□□ 0.83
Hdac8Q8VH37 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hdac8Q8VH37 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hdac8Q8VH37 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hdac8Q8VH37 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac8Q8VH37 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac8Q8VH37 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac8Q8VH37 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Hdac8Q8VH37 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Hdac8Q8VH37 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac8Q8VH37 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac8Q8VH37 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac8Q8VH37 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hdac8Q8VH37 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.22■□□□□ 0.83
Hdac8Q8VH37 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Hdac8Q8VH37 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac8Q8VH37 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac8Q8VH37 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac8Q8VH37 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac8Q8VH37 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac8Q8VH37 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac8Q8VH37 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.22■□□□□ 0.83
Hdac8Q8VH37 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac8Q8VH37 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac8Q8VH37 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac8Q8VH37 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac8Q8VH37 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac8Q8VH37 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Hdac8Q8VH37 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.21■□□□□ 0.83
Hdac8Q8VH37 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.21■□□□□ 0.83
Hdac8Q8VH37 Gm45417-201ENSMUST00000209533 758 ntBASIC20.21■□□□□ 0.83
Hdac8Q8VH37 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.21■□□□□ 0.83
Hdac8Q8VH37 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac8Q8VH37 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac8Q8VH37 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Hdac8Q8VH37 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac8Q8VH37 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac8Q8VH37 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac8Q8VH37 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hdac8Q8VH37 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.19■□□□□ 0.82
Hdac8Q8VH37 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac8Q8VH37 Gm43530-201ENSMUST00000195920 274 ntBASIC20.19■□□□□ 0.82
Hdac8Q8VH37 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Hdac8Q8VH37 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.19■□□□□ 0.82
Hdac8Q8VH37 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac8Q8VH37 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac8Q8VH37 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac8Q8VH37 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac8Q8VH37 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac8Q8VH37 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac8Q8VH37 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac8Q8VH37 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac8Q8VH37 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac8Q8VH37 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac8Q8VH37 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hdac8Q8VH37 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms