Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.29■□□□□ 0.84
Chrna3Q8R4G9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.29■□□□□ 0.84
Chrna3Q8R4G9 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Chrna3Q8R4G9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chrna3Q8R4G9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chrna3Q8R4G9 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chrna3Q8R4G9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Chrna3Q8R4G9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chrna3Q8R4G9 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chrna3Q8R4G9 Gm9847-201ENSMUST00000052528 599 ntBASIC20.28■□□□□ 0.84
Chrna3Q8R4G9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chrna3Q8R4G9 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chrna3Q8R4G9 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.28■□□□□ 0.84
Chrna3Q8R4G9 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.28■□□□□ 0.84
Chrna3Q8R4G9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.27■□□□□ 0.84
Chrna3Q8R4G9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chrna3Q8R4G9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.27■□□□□ 0.84
Chrna3Q8R4G9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.27■□□□□ 0.84
Chrna3Q8R4G9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chrna3Q8R4G9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Chrna3Q8R4G9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chrna3Q8R4G9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Chrna3Q8R4G9 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chrna3Q8R4G9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.26■□□□□ 0.83
Chrna3Q8R4G9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chrna3Q8R4G9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Chrna3Q8R4G9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Chrna3Q8R4G9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chrna3Q8R4G9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chrna3Q8R4G9 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.25■□□□□ 0.83
Chrna3Q8R4G9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.25■□□□□ 0.83
Chrna3Q8R4G9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Chrna3Q8R4G9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Chrna3Q8R4G9 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chrna3Q8R4G9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chrna3Q8R4G9 Gm12922-201ENSMUST00000120626 809 ntBASIC20.25■□□□□ 0.83
Chrna3Q8R4G9 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.25■□□□□ 0.83
Chrna3Q8R4G9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chrna3Q8R4G9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chrna3Q8R4G9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chrna3Q8R4G9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chrna3Q8R4G9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chrna3Q8R4G9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Chrna3Q8R4G9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chrna3Q8R4G9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chrna3Q8R4G9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Chrna3Q8R4G9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Chrna3Q8R4G9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Chrna3Q8R4G9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.24■□□□□ 0.83
Chrna3Q8R4G9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chrna3Q8R4G9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chrna3Q8R4G9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Chrna3Q8R4G9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chrna3Q8R4G9 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chrna3Q8R4G9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Chrna3Q8R4G9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chrna3Q8R4G9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chrna3Q8R4G9 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Chrna3Q8R4G9 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Chrna3Q8R4G9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chrna3Q8R4G9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Chrna3Q8R4G9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.22■□□□□ 0.83
Chrna3Q8R4G9 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Chrna3Q8R4G9 Gm13241-201ENSMUST00000094493 780 ntBASIC20.22■□□□□ 0.83
Chrna3Q8R4G9 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chrna3Q8R4G9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chrna3Q8R4G9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chrna3Q8R4G9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.21■□□□□ 0.83
Chrna3Q8R4G9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.21■□□□□ 0.83
Chrna3Q8R4G9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chrna3Q8R4G9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chrna3Q8R4G9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.21■□□□□ 0.83
Chrna3Q8R4G9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Chrna3Q8R4G9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chrna3Q8R4G9 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chrna3Q8R4G9 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chrna3Q8R4G9 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.2■□□□□ 0.82
Chrna3Q8R4G9 Gm9870-201ENSMUST00000063874 645 ntBASIC20.2■□□□□ 0.82
Chrna3Q8R4G9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.2■□□□□ 0.82
Chrna3Q8R4G9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.2■□□□□ 0.82
Chrna3Q8R4G9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Chrna3Q8R4G9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chrna3Q8R4G9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chrna3Q8R4G9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Chrna3Q8R4G9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Chrna3Q8R4G9 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chrna3Q8R4G9 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Chrna3Q8R4G9 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.19■□□□□ 0.82
Chrna3Q8R4G9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Chrna3Q8R4G9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Chrna3Q8R4G9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.19■□□□□ 0.82
Chrna3Q8R4G9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Chrna3Q8R4G9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chrna3Q8R4G9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chrna3Q8R4G9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chrna3Q8R4G9 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chrna3Q8R4G9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chrna3Q8R4G9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Chrna3Q8R4G9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chrna3Q8R4G9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms