Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Depdc1aQ8CIG0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Depdc1aQ8CIG0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Depdc1aQ8CIG0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Depdc1aQ8CIG0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Depdc1aQ8CIG0 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Depdc1aQ8CIG0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Depdc1aQ8CIG0 Appbp2os-202ENSMUST00000206972 447 ntBASIC23.51■■□□□ 1.35
Depdc1aQ8CIG0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC23.51■■□□□ 1.35
Depdc1aQ8CIG0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Depdc1aQ8CIG0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Depdc1aQ8CIG0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Depdc1aQ8CIG0 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
Depdc1aQ8CIG0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC23.5■■□□□ 1.35
Depdc1aQ8CIG0 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Depdc1aQ8CIG0 Gm27454-201ENSMUST00000185090 204 ntBASIC23.5■■□□□ 1.35
Depdc1aQ8CIG0 Gm9207-201ENSMUST00000198773 1115 ntBASIC23.5■■□□□ 1.35
Depdc1aQ8CIG0 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Depdc1aQ8CIG0 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Depdc1aQ8CIG0 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC23.49■■□□□ 1.35
Depdc1aQ8CIG0 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Depdc1aQ8CIG0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Depdc1aQ8CIG0 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Depdc1aQ8CIG0 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Depdc1aQ8CIG0 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Depdc1aQ8CIG0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Depdc1aQ8CIG0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC23.49■■□□□ 1.35
Depdc1aQ8CIG0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Depdc1aQ8CIG0 Gm12821-201ENSMUST00000120022 600 ntBASIC23.48■■□□□ 1.35
Depdc1aQ8CIG0 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Depdc1aQ8CIG0 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Depdc1aQ8CIG0 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC23.47■■□□□ 1.35
Depdc1aQ8CIG0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Depdc1aQ8CIG0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Depdc1aQ8CIG0 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Depdc1aQ8CIG0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Depdc1aQ8CIG0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Depdc1aQ8CIG0 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Depdc1aQ8CIG0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Depdc1aQ8CIG0 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC23.46■■□□□ 1.35
Depdc1aQ8CIG0 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Depdc1aQ8CIG0 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Depdc1aQ8CIG0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Depdc1aQ8CIG0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Depdc1aQ8CIG0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Depdc1aQ8CIG0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.35
Depdc1aQ8CIG0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC23.45■■□□□ 1.34
Depdc1aQ8CIG0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Depdc1aQ8CIG0 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Depdc1aQ8CIG0 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Depdc1aQ8CIG0 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
Depdc1aQ8CIG0 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Depdc1aQ8CIG0 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Depdc1aQ8CIG0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Depdc1aQ8CIG0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Depdc1aQ8CIG0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Depdc1aQ8CIG0 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Depdc1aQ8CIG0 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Depdc1aQ8CIG0 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Depdc1aQ8CIG0 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Depdc1aQ8CIG0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Depdc1aQ8CIG0 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Depdc1aQ8CIG0 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Depdc1aQ8CIG0 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC23.43■■□□□ 1.34
Depdc1aQ8CIG0 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Depdc1aQ8CIG0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Depdc1aQ8CIG0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC23.42■■□□□ 1.34
Depdc1aQ8CIG0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC23.42■■□□□ 1.34
Depdc1aQ8CIG0 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Depdc1aQ8CIG0 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Depdc1aQ8CIG0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Depdc1aQ8CIG0 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Depdc1aQ8CIG0 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Depdc1aQ8CIG0 Gm45417-201ENSMUST00000209533 758 ntBASIC23.41■■□□□ 1.34
Depdc1aQ8CIG0 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Depdc1aQ8CIG0 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
Depdc1aQ8CIG0 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC23.41■■□□□ 1.34
Depdc1aQ8CIG0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Depdc1aQ8CIG0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Depdc1aQ8CIG0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Depdc1aQ8CIG0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC23.4■■□□□ 1.34
Depdc1aQ8CIG0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Depdc1aQ8CIG0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Depdc1aQ8CIG0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Depdc1aQ8CIG0 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC23.39■■□□□ 1.33
Depdc1aQ8CIG0 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
Depdc1aQ8CIG0 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Depdc1aQ8CIG0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Depdc1aQ8CIG0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Depdc1aQ8CIG0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC23.38■■□□□ 1.33
Depdc1aQ8CIG0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC23.38■■□□□ 1.33
Depdc1aQ8CIG0 Gm44949-201ENSMUST00000206423 1450 ntBASIC23.38■■□□□ 1.33
Depdc1aQ8CIG0 Gm8770-201ENSMUST00000121113 1109 ntBASIC23.38■■□□□ 1.33
Depdc1aQ8CIG0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Depdc1aQ8CIG0 Gm5913-201ENSMUST00000119397 1399 ntBASIC23.38■■□□□ 1.33
Depdc1aQ8CIG0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Depdc1aQ8CIG0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC23.37■■□□□ 1.33
Depdc1aQ8CIG0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Depdc1aQ8CIG0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Depdc1aQ8CIG0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms