Protein–RNA interactions for Protein: Q8BYI9

Tnr, Tenascin-R, mousemouse

Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnrQ8BYI9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
TnrQ8BYI9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
TnrQ8BYI9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
TnrQ8BYI9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC27.33■■□□□ 1.97
TnrQ8BYI9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC27.33■■□□□ 1.96
TnrQ8BYI9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
TnrQ8BYI9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
TnrQ8BYI9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC27.32■■□□□ 1.96
TnrQ8BYI9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC27.32■■□□□ 1.96
TnrQ8BYI9 Gm7160-202ENSMUST00000188519 1027 ntBASIC27.32■■□□□ 1.96
TnrQ8BYI9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC27.32■■□□□ 1.96
TnrQ8BYI9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC27.32■■□□□ 1.96
TnrQ8BYI9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TnrQ8BYI9 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TnrQ8BYI9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
TnrQ8BYI9 Gm26833-201ENSMUST00000180899 440 ntBASIC27.31■■□□□ 1.96
TnrQ8BYI9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TnrQ8BYI9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
TnrQ8BYI9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
TnrQ8BYI9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
TnrQ8BYI9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TnrQ8BYI9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
TnrQ8BYI9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
TnrQ8BYI9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC27.3■■□□□ 1.96
TnrQ8BYI9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
TnrQ8BYI9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
TnrQ8BYI9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
TnrQ8BYI9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
TnrQ8BYI9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
TnrQ8BYI9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
TnrQ8BYI9 Gm26571-201ENSMUST00000181399 666 ntBASIC27.29■■□□□ 1.96
TnrQ8BYI9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
TnrQ8BYI9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
TnrQ8BYI9 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC27.29■■□□□ 1.96
TnrQ8BYI9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
TnrQ8BYI9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
TnrQ8BYI9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC27.29■■□□□ 1.96
TnrQ8BYI9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
TnrQ8BYI9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC27.28■■□□□ 1.96
TnrQ8BYI9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TnrQ8BYI9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
TnrQ8BYI9 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
TnrQ8BYI9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TnrQ8BYI9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
TnrQ8BYI9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TnrQ8BYI9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
TnrQ8BYI9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.96
TnrQ8BYI9 Gm7291-201ENSMUST00000199147 382 ntBASIC27.26■■□□□ 1.95
TnrQ8BYI9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TnrQ8BYI9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
TnrQ8BYI9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
TnrQ8BYI9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
TnrQ8BYI9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
TnrQ8BYI9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
TnrQ8BYI9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC27.24■■□□□ 1.95
TnrQ8BYI9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
TnrQ8BYI9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
TnrQ8BYI9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
TnrQ8BYI9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
TnrQ8BYI9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC27.23■■□□□ 1.95
TnrQ8BYI9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC27.23■■□□□ 1.95
TnrQ8BYI9 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC27.23■■□□□ 1.95
TnrQ8BYI9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC27.23■■□□□ 1.95
TnrQ8BYI9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
TnrQ8BYI9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
TnrQ8BYI9 Gm10849-201ENSMUST00000100397 618 ntBASIC27.22■■□□□ 1.95
TnrQ8BYI9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC27.22■■□□□ 1.95
TnrQ8BYI9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
TnrQ8BYI9 Gm10493-201ENSMUST00000097270 612 ntBASIC27.22■■□□□ 1.95
TnrQ8BYI9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TnrQ8BYI9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
TnrQ8BYI9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
TnrQ8BYI9 Gm43060-201ENSMUST00000200621 289 ntBASIC27.22■■□□□ 1.95
TnrQ8BYI9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC27.22■■□□□ 1.95
TnrQ8BYI9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TnrQ8BYI9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
TnrQ8BYI9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
TnrQ8BYI9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
TnrQ8BYI9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
TnrQ8BYI9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
TnrQ8BYI9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC27.2■■□□□ 1.95
TnrQ8BYI9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
TnrQ8BYI9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC27.2■■□□□ 1.94
TnrQ8BYI9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
TnrQ8BYI9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
TnrQ8BYI9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
TnrQ8BYI9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC27.19■■□□□ 1.94
TnrQ8BYI9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TnrQ8BYI9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC27.19■■□□□ 1.94
TnrQ8BYI9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC27.19■■□□□ 1.94
TnrQ8BYI9 Gm40848-201ENSMUST00000221998 324 ntBASIC27.19■■□□□ 1.94
TnrQ8BYI9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
TnrQ8BYI9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
TnrQ8BYI9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
TnrQ8BYI9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
TnrQ8BYI9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
TnrQ8BYI9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC27.18■■□□□ 1.94
TnrQ8BYI9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
TnrQ8BYI9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
TnrQ8BYI9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms