Protein–RNA interactions for Protein: Q8BUE1

Slc9a4, Sodium/hydrogen exchanger 4, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a4Q8BUE1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Slc9a4Q8BUE1 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc9a4Q8BUE1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc9a4Q8BUE1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc9a4Q8BUE1 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
Slc9a4Q8BUE1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc9a4Q8BUE1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Slc9a4Q8BUE1 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc9a4Q8BUE1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Slc9a4Q8BUE1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc9a4Q8BUE1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slc9a4Q8BUE1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.68■■□□□ 1.06
Slc9a4Q8BUE1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.68■■□□□ 1.06
Slc9a4Q8BUE1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc9a4Q8BUE1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc9a4Q8BUE1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc9a4Q8BUE1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc9a4Q8BUE1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc9a4Q8BUE1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc9a4Q8BUE1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc9a4Q8BUE1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Slc9a4Q8BUE1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Slc9a4Q8BUE1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Slc9a4Q8BUE1 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc9a4Q8BUE1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc9a4Q8BUE1 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Slc9a4Q8BUE1 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Slc9a4Q8BUE1 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Slc9a4Q8BUE1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slc9a4Q8BUE1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slc9a4Q8BUE1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slc9a4Q8BUE1 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slc9a4Q8BUE1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc9a4Q8BUE1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc9a4Q8BUE1 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Slc9a4Q8BUE1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc9a4Q8BUE1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Slc9a4Q8BUE1 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc9a4Q8BUE1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc9a4Q8BUE1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc9a4Q8BUE1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.62■■□□□ 1.05
Slc9a4Q8BUE1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc9a4Q8BUE1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Slc9a4Q8BUE1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc9a4Q8BUE1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc9a4Q8BUE1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Slc9a4Q8BUE1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Slc9a4Q8BUE1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc9a4Q8BUE1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.62■■□□□ 1.05
Slc9a4Q8BUE1 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.62■■□□□ 1.05
Slc9a4Q8BUE1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Slc9a4Q8BUE1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Slc9a4Q8BUE1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Slc9a4Q8BUE1 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Slc9a4Q8BUE1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.61■■□□□ 1.05
Slc9a4Q8BUE1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Slc9a4Q8BUE1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Slc9a4Q8BUE1 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Slc9a4Q8BUE1 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Slc9a4Q8BUE1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slc9a4Q8BUE1 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.6■■□□□ 1.05
Slc9a4Q8BUE1 Gm22238-201ENSMUST00000175222 88 ntBASIC21.6■■□□□ 1.05
Slc9a4Q8BUE1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Slc9a4Q8BUE1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.6■■□□□ 1.05
Slc9a4Q8BUE1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Slc9a4Q8BUE1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Slc9a4Q8BUE1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slc9a4Q8BUE1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Slc9a4Q8BUE1 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.59■■□□□ 1.05
Slc9a4Q8BUE1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Slc9a4Q8BUE1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Slc9a4Q8BUE1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Slc9a4Q8BUE1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Slc9a4Q8BUE1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Slc9a4Q8BUE1 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Slc9a4Q8BUE1 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.58■■□□□ 1.05
Slc9a4Q8BUE1 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Slc9a4Q8BUE1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Slc9a4Q8BUE1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.58■■□□□ 1.05
Slc9a4Q8BUE1 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Slc9a4Q8BUE1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Slc9a4Q8BUE1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Slc9a4Q8BUE1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Slc9a4Q8BUE1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Slc9a4Q8BUE1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Slc9a4Q8BUE1 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
Slc9a4Q8BUE1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.57■■□□□ 1.04
Slc9a4Q8BUE1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Slc9a4Q8BUE1 Gm7143-201ENSMUST00000222811 859 ntBASIC21.57■■□□□ 1.04
Slc9a4Q8BUE1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Slc9a4Q8BUE1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Slc9a4Q8BUE1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Slc9a4Q8BUE1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Slc9a4Q8BUE1 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Slc9a4Q8BUE1 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Slc9a4Q8BUE1 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Slc9a4Q8BUE1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Slc9a4Q8BUE1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Slc9a4Q8BUE1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.56■■□□□ 1.04
Slc9a4Q8BUE1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms