Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 Gm8495-201ENSMUST00000188740 694 ntBASIC20.62■□□□□ 0.89
Cacna1eQ61290 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cacna1eQ61290 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cacna1eQ61290 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Cacna1eQ61290 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cacna1eQ61290 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cacna1eQ61290 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
Cacna1eQ61290 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Cacna1eQ61290 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cacna1eQ61290 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cacna1eQ61290 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.62■□□□□ 0.89
Cacna1eQ61290 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cacna1eQ61290 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cacna1eQ61290 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.61■□□□□ 0.89
Cacna1eQ61290 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cacna1eQ61290 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cacna1eQ61290 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.61■□□□□ 0.89
Cacna1eQ61290 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cacna1eQ61290 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.61■□□□□ 0.89
Cacna1eQ61290 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cacna1eQ61290 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cacna1eQ61290 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cacna1eQ61290 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.6■□□□□ 0.89
Cacna1eQ61290 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cacna1eQ61290 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cacna1eQ61290 Spcs1-204ENSMUST00000226782 949 ntBASIC20.6■□□□□ 0.89
Cacna1eQ61290 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.59■□□□□ 0.89
Cacna1eQ61290 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.59■□□□□ 0.89
Cacna1eQ61290 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.59■□□□□ 0.89
Cacna1eQ61290 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cacna1eQ61290 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cacna1eQ61290 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cacna1eQ61290 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cacna1eQ61290 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Cacna1eQ61290 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.58■□□□□ 0.89
Cacna1eQ61290 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cacna1eQ61290 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.58■□□□□ 0.89
Cacna1eQ61290 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
Cacna1eQ61290 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cacna1eQ61290 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cacna1eQ61290 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cacna1eQ61290 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.58■□□□□ 0.88
Cacna1eQ61290 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cacna1eQ61290 Gm8493-201ENSMUST00000196881 489 ntBASIC20.58■□□□□ 0.88
Cacna1eQ61290 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cacna1eQ61290 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cacna1eQ61290 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Cacna1eQ61290 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.57■□□□□ 0.88
Cacna1eQ61290 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cacna1eQ61290 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1eQ61290 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
Cacna1eQ61290 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.56■□□□□ 0.88
Cacna1eQ61290 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1eQ61290 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1eQ61290 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1eQ61290 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.56■□□□□ 0.88
Cacna1eQ61290 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1eQ61290 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cacna1eQ61290 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cacna1eQ61290 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cacna1eQ61290 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cacna1eQ61290 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cacna1eQ61290 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.55■□□□□ 0.88
Cacna1eQ61290 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.55■□□□□ 0.88
Cacna1eQ61290 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.54■□□□□ 0.88
Cacna1eQ61290 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cacna1eQ61290 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cacna1eQ61290 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cacna1eQ61290 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cacna1eQ61290 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cacna1eQ61290 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Cacna1eQ61290 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cacna1eQ61290 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Cacna1eQ61290 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cacna1eQ61290 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cacna1eQ61290 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Cacna1eQ61290 Gm5874-201ENSMUST00000096101 508 ntBASIC20.52■□□□□ 0.88
Cacna1eQ61290 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cacna1eQ61290 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cacna1eQ61290 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cacna1eQ61290 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Cacna1eQ61290 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cacna1eQ61290 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cacna1eQ61290 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Cacna1eQ61290 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Cacna1eQ61290 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cacna1eQ61290 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Cacna1eQ61290 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Cacna1eQ61290 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cacna1eQ61290 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cacna1eQ61290 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cacna1eQ61290 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cacna1eQ61290 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cacna1eQ61290 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cacna1eQ61290 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Cacna1eQ61290 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cacna1eQ61290 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Cacna1eQ61290 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cacna1eQ61290 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.49■□□□□ 0.87
Cacna1eQ61290 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms