Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.29■■□□□ 1
Satb1Q60611 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Satb1Q60611 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Satb1Q60611 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Satb1Q60611 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.28■■□□□ 1
Satb1Q60611 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Satb1Q60611 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.28■■□□□ 1
Satb1Q60611 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.28■■□□□ 1
Satb1Q60611 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Satb1Q60611 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.27■■□□□ 1
Satb1Q60611 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC21.27■■□□□ 1
Satb1Q60611 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.27■■□□□ 1
Satb1Q60611 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Satb1Q60611 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Satb1Q60611 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Satb1Q60611 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Satb1Q60611 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Satb1Q60611 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Satb1Q60611 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
Satb1Q60611 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Satb1Q60611 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Satb1Q60611 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Satb1Q60611 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.26■□□□□ 0.99
Satb1Q60611 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Satb1Q60611 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Satb1Q60611 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Satb1Q60611 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Satb1Q60611 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Satb1Q60611 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Satb1Q60611 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Satb1Q60611 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Satb1Q60611 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.25■□□□□ 0.99
Satb1Q60611 Gm8493-201ENSMUST00000196881 489 ntBASIC21.25■□□□□ 0.99
Satb1Q60611 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Satb1Q60611 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Satb1Q60611 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Satb1Q60611 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Satb1Q60611 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Satb1Q60611 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Satb1Q60611 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Satb1Q60611 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Satb1Q60611 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Satb1Q60611 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Satb1Q60611 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC21.24■□□□□ 0.99
Satb1Q60611 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Satb1Q60611 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
Satb1Q60611 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.23■□□□□ 0.99
Satb1Q60611 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Satb1Q60611 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Satb1Q60611 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Satb1Q60611 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Satb1Q60611 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Satb1Q60611 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Satb1Q60611 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Satb1Q60611 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Satb1Q60611 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Satb1Q60611 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Satb1Q60611 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Satb1Q60611 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.22■□□□□ 0.99
Satb1Q60611 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Satb1Q60611 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Satb1Q60611 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Satb1Q60611 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Satb1Q60611 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Satb1Q60611 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Satb1Q60611 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Satb1Q60611 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Satb1Q60611 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Satb1Q60611 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Satb1Q60611 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Satb1Q60611 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Satb1Q60611 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Satb1Q60611 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.2■□□□□ 0.98
Satb1Q60611 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.2■□□□□ 0.98
Satb1Q60611 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Satb1Q60611 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Satb1Q60611 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
Satb1Q60611 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Satb1Q60611 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Satb1Q60611 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Satb1Q60611 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Satb1Q60611 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Satb1Q60611 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.19■□□□□ 0.98
Satb1Q60611 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Satb1Q60611 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Satb1Q60611 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.19■□□□□ 0.98
Satb1Q60611 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Satb1Q60611 Gm37179-201ENSMUST00000194862 823 ntBASIC21.19■□□□□ 0.98
Satb1Q60611 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Satb1Q60611 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.19■□□□□ 0.98
Satb1Q60611 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Satb1Q60611 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Satb1Q60611 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Satb1Q60611 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Satb1Q60611 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Satb1Q60611 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
Satb1Q60611 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Satb1Q60611 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Satb1Q60611 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
Satb1Q60611 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms