Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rc3h1Q4VGL6 Gm27454-201ENSMUST00000185090 204 ntBASIC24.06■■□□□ 1.44
Rc3h1Q4VGL6 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rc3h1Q4VGL6 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
Rc3h1Q4VGL6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rc3h1Q4VGL6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rc3h1Q4VGL6 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC24.05■■□□□ 1.44
Rc3h1Q4VGL6 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC24.05■■□□□ 1.44
Rc3h1Q4VGL6 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC24.05■■□□□ 1.44
Rc3h1Q4VGL6 Gm26766-202ENSMUST00000227544 2347 ntBASIC24.05■■□□□ 1.44
Rc3h1Q4VGL6 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rc3h1Q4VGL6 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rc3h1Q4VGL6 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Rc3h1Q4VGL6 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Rc3h1Q4VGL6 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
Rc3h1Q4VGL6 Appbp2os-202ENSMUST00000206972 447 ntBASIC24.04■■□□□ 1.44
Rc3h1Q4VGL6 Gm7143-201ENSMUST00000222811 859 ntBASIC24.04■■□□□ 1.44
Rc3h1Q4VGL6 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC24.04■■□□□ 1.44
Rc3h1Q4VGL6 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rc3h1Q4VGL6 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rc3h1Q4VGL6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rc3h1Q4VGL6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rc3h1Q4VGL6 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Rc3h1Q4VGL6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rc3h1Q4VGL6 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rc3h1Q4VGL6 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC24.03■■□□□ 1.44
Rc3h1Q4VGL6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Rc3h1Q4VGL6 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rc3h1Q4VGL6 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Rc3h1Q4VGL6 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
Rc3h1Q4VGL6 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Rc3h1Q4VGL6 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC24.02■■□□□ 1.44
Rc3h1Q4VGL6 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rc3h1Q4VGL6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rc3h1Q4VGL6 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rc3h1Q4VGL6 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rc3h1Q4VGL6 Krt8-ps-201ENSMUST00000208495 945 ntBASIC24.02■■□□□ 1.44
Rc3h1Q4VGL6 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Rc3h1Q4VGL6 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rc3h1Q4VGL6 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Rc3h1Q4VGL6 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rc3h1Q4VGL6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Rc3h1Q4VGL6 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC24.02■■□□□ 1.44
Rc3h1Q4VGL6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rc3h1Q4VGL6 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC24.01■■□□□ 1.43
Rc3h1Q4VGL6 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rc3h1Q4VGL6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC24.01■■□□□ 1.43
Rc3h1Q4VGL6 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC24.01■■□□□ 1.43
Rc3h1Q4VGL6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rc3h1Q4VGL6 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rc3h1Q4VGL6 Gm10657-201ENSMUST00000193528 1031 ntBASIC24.01■■□□□ 1.43
Rc3h1Q4VGL6 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Rc3h1Q4VGL6 Gm9207-201ENSMUST00000198773 1115 ntBASIC24.01■■□□□ 1.43
Rc3h1Q4VGL6 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Rc3h1Q4VGL6 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
Rc3h1Q4VGL6 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Rc3h1Q4VGL6 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
Rc3h1Q4VGL6 Gm45417-201ENSMUST00000209533 758 ntBASIC24■■□□□ 1.43
Rc3h1Q4VGL6 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Rc3h1Q4VGL6 Gm43403-201ENSMUST00000198011 1786 ntBASIC24■■□□□ 1.43
Rc3h1Q4VGL6 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC24■■□□□ 1.43
Rc3h1Q4VGL6 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Rc3h1Q4VGL6 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Rc3h1Q4VGL6 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Rc3h1Q4VGL6 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rc3h1Q4VGL6 Gm12821-201ENSMUST00000120022 600 ntBASIC23.99■■□□□ 1.43
Rc3h1Q4VGL6 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rc3h1Q4VGL6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Rc3h1Q4VGL6 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rc3h1Q4VGL6 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Rc3h1Q4VGL6 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Rc3h1Q4VGL6 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC23.98■■□□□ 1.43
Rc3h1Q4VGL6 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rc3h1Q4VGL6 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rc3h1Q4VGL6 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rc3h1Q4VGL6 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC23.97■■□□□ 1.43
Rc3h1Q4VGL6 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC23.97■■□□□ 1.43
Rc3h1Q4VGL6 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Rc3h1Q4VGL6 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Rc3h1Q4VGL6 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
Rc3h1Q4VGL6 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rc3h1Q4VGL6 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rc3h1Q4VGL6 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Rc3h1Q4VGL6 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC23.96■■□□□ 1.43
Rc3h1Q4VGL6 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
Rc3h1Q4VGL6 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rc3h1Q4VGL6 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rc3h1Q4VGL6 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Rc3h1Q4VGL6 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rc3h1Q4VGL6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rc3h1Q4VGL6 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rc3h1Q4VGL6 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rc3h1Q4VGL6 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
Rc3h1Q4VGL6 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Rc3h1Q4VGL6 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rc3h1Q4VGL6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Rc3h1Q4VGL6 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
Rc3h1Q4VGL6 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rc3h1Q4VGL6 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Rc3h1Q4VGL6 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms