Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cks1brtQ3UNC9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cks1brtQ3UNC9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cks1brtQ3UNC9 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cks1brtQ3UNC9 Gm8109-201ENSMUST00000194076 746 ntBASIC14.94□□□□□ -0.02
Cks1brtQ3UNC9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cks1brtQ3UNC9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Cks1brtQ3UNC9 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cks1brtQ3UNC9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cks1brtQ3UNC9 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cks1brtQ3UNC9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Cks1brtQ3UNC9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cks1brtQ3UNC9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Cks1brtQ3UNC9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cks1brtQ3UNC9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cks1brtQ3UNC9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cks1brtQ3UNC9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cks1brtQ3UNC9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cks1brtQ3UNC9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cks1brtQ3UNC9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cks1brtQ3UNC9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC14.92□□□□□ -0.02
Cks1brtQ3UNC9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cks1brtQ3UNC9 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cks1brtQ3UNC9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cks1brtQ3UNC9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cks1brtQ3UNC9 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
Cks1brtQ3UNC9 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Cks1brtQ3UNC9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cks1brtQ3UNC9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cks1brtQ3UNC9 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cks1brtQ3UNC9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cks1brtQ3UNC9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cks1brtQ3UNC9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cks1brtQ3UNC9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cks1brtQ3UNC9 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Cks1brtQ3UNC9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Cks1brtQ3UNC9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cks1brtQ3UNC9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cks1brtQ3UNC9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Cks1brtQ3UNC9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cks1brtQ3UNC9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cks1brtQ3UNC9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cks1brtQ3UNC9 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC14.91□□□□□ -0.02
Cks1brtQ3UNC9 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cks1brtQ3UNC9 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC14.91□□□□□ -0.02
Cks1brtQ3UNC9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Cks1brtQ3UNC9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cks1brtQ3UNC9 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cks1brtQ3UNC9 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cks1brtQ3UNC9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.9□□□□□ -0.02
Cks1brtQ3UNC9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC14.9□□□□□ -0.02
Cks1brtQ3UNC9 AC164433.2-201ENSMUST00000226346 1701 ntBASIC14.9□□□□□ -0.02
Cks1brtQ3UNC9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cks1brtQ3UNC9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cks1brtQ3UNC9 Gm24804-201ENSMUST00000174982 85 ntBASIC14.9□□□□□ -0.02
Cks1brtQ3UNC9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC14.9□□□□□ -0.02
Cks1brtQ3UNC9 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.9□□□□□ -0.02
Cks1brtQ3UNC9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cks1brtQ3UNC9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cks1brtQ3UNC9 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cks1brtQ3UNC9 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cks1brtQ3UNC9 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cks1brtQ3UNC9 Golph3-202ENSMUST00000226517 2359 ntBASIC14.9□□□□□ -0.02
Cks1brtQ3UNC9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cks1brtQ3UNC9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cks1brtQ3UNC9 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cks1brtQ3UNC9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cks1brtQ3UNC9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cks1brtQ3UNC9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Cks1brtQ3UNC9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cks1brtQ3UNC9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cks1brtQ3UNC9 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cks1brtQ3UNC9 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cks1brtQ3UNC9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cks1brtQ3UNC9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cks1brtQ3UNC9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cks1brtQ3UNC9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cks1brtQ3UNC9 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cks1brtQ3UNC9 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cks1brtQ3UNC9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cks1brtQ3UNC9 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cks1brtQ3UNC9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cks1brtQ3UNC9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cks1brtQ3UNC9 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC14.88□□□□□ -0.03
Cks1brtQ3UNC9 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cks1brtQ3UNC9 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.88□□□□□ -0.03
Cks1brtQ3UNC9 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cks1brtQ3UNC9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cks1brtQ3UNC9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cks1brtQ3UNC9 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cks1brtQ3UNC9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cks1brtQ3UNC9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cks1brtQ3UNC9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cks1brtQ3UNC9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cks1brtQ3UNC9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cks1brtQ3UNC9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cks1brtQ3UNC9 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cks1brtQ3UNC9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cks1brtQ3UNC9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cks1brtQ3UNC9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 297 ms