Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cks1bP61025 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cks1bP61025 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.07
Cks1bP61025 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cks1bP61025 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Cks1bP61025 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cks1bP61025 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Cks1bP61025 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cks1bP61025 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.58□□□□□ -0.08
Cks1bP61025 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cks1bP61025 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC14.58□□□□□ -0.08
Cks1bP61025 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cks1bP61025 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Cks1bP61025 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cks1bP61025 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cks1bP61025 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.57□□□□□ -0.08
Cks1bP61025 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC14.57□□□□□ -0.08
Cks1bP61025 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Cks1bP61025 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cks1bP61025 Gm9812-201ENSMUST00000061934 968 ntBASIC14.57□□□□□ -0.08
Cks1bP61025 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cks1bP61025 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cks1bP61025 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cks1bP61025 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cks1bP61025 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cks1bP61025 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cks1bP61025 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cks1bP61025 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cks1bP61025 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC14.57□□□□□ -0.08
Cks1bP61025 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cks1bP61025 Gm9910-201ENSMUST00000195385 1550 ntBASIC14.56□□□□□ -0.08
Cks1bP61025 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cks1bP61025 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cks1bP61025 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Cks1bP61025 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cks1bP61025 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cks1bP61025 Mir3960-201ENSMUST00000198213 73 ntBASIC14.56□□□□□ -0.08
Cks1bP61025 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC14.56□□□□□ -0.08
Cks1bP61025 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC14.56□□□□□ -0.08
Cks1bP61025 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cks1bP61025 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cks1bP61025 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cks1bP61025 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cks1bP61025 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cks1bP61025 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cks1bP61025 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cks1bP61025 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cks1bP61025 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cks1bP61025 Gm34220-201ENSMUST00000223001 2709 ntBASIC14.55□□□□□ -0.08
Cks1bP61025 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cks1bP61025 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC14.55□□□□□ -0.08
Cks1bP61025 Gm22567-201ENSMUST00000175542 342 ntBASIC14.55□□□□□ -0.08
Cks1bP61025 AC122317.2-201ENSMUST00000218708 1248 ntBASIC14.55□□□□□ -0.08
Cks1bP61025 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cks1bP61025 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cks1bP61025 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cks1bP61025 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cks1bP61025 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cks1bP61025 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.54□□□□□ -0.08
Cks1bP61025 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cks1bP61025 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cks1bP61025 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC14.54□□□□□ -0.08
Cks1bP61025 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Cks1bP61025 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cks1bP61025 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cks1bP61025 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cks1bP61025 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cks1bP61025 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC14.54□□□□□ -0.08
Cks1bP61025 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cks1bP61025 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cks1bP61025 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cks1bP61025 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cks1bP61025 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.53□□□□□ -0.08
Cks1bP61025 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cks1bP61025 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cks1bP61025 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cks1bP61025 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cks1bP61025 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC14.53□□□□□ -0.08
Cks1bP61025 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cks1bP61025 Terc-201ENSMUST00000082862 423 ntBASIC14.53□□□□□ -0.08
Cks1bP61025 Gm43545-201ENSMUST00000196765 2779 ntBASIC14.53□□□□□ -0.08
Cks1bP61025 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cks1bP61025 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
Cks1bP61025 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Cks1bP61025 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cks1bP61025 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cks1bP61025 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Cks1bP61025 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cks1bP61025 Gm8503-201ENSMUST00000118131 455 ntBASIC14.52□□□□□ -0.09
Cks1bP61025 AC154454.1-201ENSMUST00000225253 216 ntBASIC14.52□□□□□ -0.09
Cks1bP61025 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.52□□□□□ -0.09
Cks1bP61025 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cks1bP61025 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC14.51□□□□□ -0.09
Cks1bP61025 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cks1bP61025 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cks1bP61025 Rarb-207ENSMUST00000225921 2756 ntBASIC14.51□□□□□ -0.09
Cks1bP61025 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cks1bP61025 Gm12818-201ENSMUST00000117562 1349 ntBASIC14.51□□□□□ -0.09
Cks1bP61025 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Cks1bP61025 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms