Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx6P54823 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.16■□□□□ 0.98
Ddx6P54823 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx6P54823 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.15■□□□□ 0.98
Ddx6P54823 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx6P54823 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx6P54823 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx6P54823 Mir7075-201ENSMUST00000184187 82 ntBASIC21.15■□□□□ 0.98
Ddx6P54823 Gm43530-201ENSMUST00000195920 274 ntBASIC21.15■□□□□ 0.98
Ddx6P54823 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.15■□□□□ 0.98
Ddx6P54823 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.15■□□□□ 0.98
Ddx6P54823 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx6P54823 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx6P54823 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx6P54823 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ddx6P54823 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ddx6P54823 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.14■□□□□ 0.97
Ddx6P54823 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx6P54823 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx6P54823 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.14■□□□□ 0.97
Ddx6P54823 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx6P54823 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx6P54823 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.14■□□□□ 0.97
Ddx6P54823 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.14■□□□□ 0.97
Ddx6P54823 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx6P54823 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx6P54823 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.13■□□□□ 0.97
Ddx6P54823 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx6P54823 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx6P54823 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.13■□□□□ 0.97
Ddx6P54823 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx6P54823 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.12■□□□□ 0.97
Ddx6P54823 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx6P54823 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx6P54823 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Ddx6P54823 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx6P54823 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx6P54823 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx6P54823 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx6P54823 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx6P54823 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx6P54823 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx6P54823 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx6P54823 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.11■□□□□ 0.97
Ddx6P54823 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.11■□□□□ 0.97
Ddx6P54823 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx6P54823 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx6P54823 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx6P54823 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx6P54823 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx6P54823 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx6P54823 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Ddx6P54823 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.1■□□□□ 0.97
Ddx6P54823 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.09■□□□□ 0.97
Ddx6P54823 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.09■□□□□ 0.97
Ddx6P54823 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx6P54823 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx6P54823 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Ddx6P54823 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.09■□□□□ 0.97
Ddx6P54823 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Ddx6P54823 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx6P54823 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx6P54823 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx6P54823 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx6P54823 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx6P54823 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx6P54823 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Ddx6P54823 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx6P54823 Gm8493-201ENSMUST00000196881 489 ntBASIC21.08■□□□□ 0.97
Ddx6P54823 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.08■□□□□ 0.97
Ddx6P54823 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Ddx6P54823 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
Ddx6P54823 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ddx6P54823 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ddx6P54823 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx6P54823 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx6P54823 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx6P54823 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
Ddx6P54823 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.07■□□□□ 0.96
Ddx6P54823 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.07■□□□□ 0.96
Ddx6P54823 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.07■□□□□ 0.96
Ddx6P54823 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx6P54823 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx6P54823 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx6P54823 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Ddx6P54823 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.06■□□□□ 0.96
Ddx6P54823 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx6P54823 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx6P54823 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx6P54823 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Ddx6P54823 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx6P54823 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx6P54823 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
Ddx6P54823 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.05■□□□□ 0.96
Ddx6P54823 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Ddx6P54823 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx6P54823 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx6P54823 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Ddx6P54823 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx6P54823 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms