Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Xcl1P47993 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Xcl1P47993 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Xcl1P47993 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Xcl1P47993 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Xcl1P47993 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC13.55□□□□□ -0.24
Xcl1P47993 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Xcl1P47993 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Xcl1P47993 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Xcl1P47993 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC13.55□□□□□ -0.24
Xcl1P47993 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Xcl1P47993 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Xcl1P47993 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Xcl1P47993 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC13.54□□□□□ -0.24
Xcl1P47993 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Xcl1P47993 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Xcl1P47993 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC13.54□□□□□ -0.24
Xcl1P47993 Gm27322-201ENSMUST00000184007 104 ntBASIC13.54□□□□□ -0.24
Xcl1P47993 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Xcl1P47993 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Xcl1P47993 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Xcl1P47993 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Xcl1P47993 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Xcl1P47993 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Xcl1P47993 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Xcl1P47993 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.53□□□□□ -0.24
Xcl1P47993 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Xcl1P47993 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Xcl1P47993 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Xcl1P47993 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Xcl1P47993 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Xcl1P47993 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Xcl1P47993 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Xcl1P47993 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Xcl1P47993 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Xcl1P47993 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Xcl1P47993 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Xcl1P47993 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Xcl1P47993 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Xcl1P47993 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Xcl1P47993 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Xcl1P47993 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Xcl1P47993 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Xcl1P47993 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC13.52□□□□□ -0.24
Xcl1P47993 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Xcl1P47993 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.25
Xcl1P47993 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Xcl1P47993 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC13.52□□□□□ -0.25
Xcl1P47993 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Xcl1P47993 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Xcl1P47993 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Xcl1P47993 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Xcl1P47993 Kdm3b-204ENSMUST00000224715 2032 ntBASIC13.51□□□□□ -0.25
Xcl1P47993 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Xcl1P47993 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Xcl1P47993 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Xcl1P47993 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
Xcl1P47993 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Xcl1P47993 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Xcl1P47993 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Xcl1P47993 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Xcl1P47993 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Xcl1P47993 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Xcl1P47993 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Xcl1P47993 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Xcl1P47993 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Xcl1P47993 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Xcl1P47993 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Xcl1P47993 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Xcl1P47993 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Xcl1P47993 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Xcl1P47993 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Xcl1P47993 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Xcl1P47993 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Xcl1P47993 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Xcl1P47993 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Xcl1P47993 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Xcl1P47993 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Xcl1P47993 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Xcl1P47993 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Xcl1P47993 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Xcl1P47993 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Xcl1P47993 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Xcl1P47993 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Xcl1P47993 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Xcl1P47993 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Xcl1P47993 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Xcl1P47993 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Xcl1P47993 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Xcl1P47993 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Xcl1P47993 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Xcl1P47993 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Xcl1P47993 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Xcl1P47993 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Xcl1P47993 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Xcl1P47993 Gm43545-201ENSMUST00000196765 2779 ntBASIC13.48□□□□□ -0.25
Xcl1P47993 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Xcl1P47993 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Xcl1P47993 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Xcl1P47993 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms