Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
LdlrP35951 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
LdlrP35951 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LdlrP35951 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LdlrP35951 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LdlrP35951 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
LdlrP35951 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LdlrP35951 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LdlrP35951 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
LdlrP35951 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
LdlrP35951 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.48■□□□□ 0.87
LdlrP35951 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LdlrP35951 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LdlrP35951 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LdlrP35951 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LdlrP35951 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LdlrP35951 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LdlrP35951 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LdlrP35951 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LdlrP35951 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LdlrP35951 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.47■□□□□ 0.87
LdlrP35951 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.47■□□□□ 0.87
LdlrP35951 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
LdlrP35951 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
LdlrP35951 Gm14117-201ENSMUST00000122417 843 ntBASIC20.47■□□□□ 0.87
LdlrP35951 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.47■□□□□ 0.87
LdlrP35951 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LdlrP35951 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.47■□□□□ 0.87
LdlrP35951 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LdlrP35951 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
LdlrP35951 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LdlrP35951 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LdlrP35951 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LdlrP35951 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LdlrP35951 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LdlrP35951 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LdlrP35951 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LdlrP35951 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LdlrP35951 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LdlrP35951 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LdlrP35951 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
LdlrP35951 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
LdlrP35951 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LdlrP35951 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LdlrP35951 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LdlrP35951 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LdlrP35951 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.46■□□□□ 0.87
LdlrP35951 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.46■□□□□ 0.87
LdlrP35951 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LdlrP35951 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LdlrP35951 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LdlrP35951 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LdlrP35951 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LdlrP35951 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
LdlrP35951 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
LdlrP35951 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LdlrP35951 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LdlrP35951 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LdlrP35951 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LdlrP35951 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.45■□□□□ 0.86
LdlrP35951 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.45■□□□□ 0.86
LdlrP35951 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LdlrP35951 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.45■□□□□ 0.86
LdlrP35951 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LdlrP35951 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.45■□□□□ 0.86
LdlrP35951 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
LdlrP35951 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LdlrP35951 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LdlrP35951 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LdlrP35951 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LdlrP35951 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LdlrP35951 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LdlrP35951 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LdlrP35951 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LdlrP35951 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LdlrP35951 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LdlrP35951 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
LdlrP35951 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.43■□□□□ 0.86
LdlrP35951 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LdlrP35951 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LdlrP35951 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LdlrP35951 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LdlrP35951 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
LdlrP35951 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LdlrP35951 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LdlrP35951 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LdlrP35951 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.42■□□□□ 0.86
LdlrP35951 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LdlrP35951 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LdlrP35951 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LdlrP35951 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
LdlrP35951 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LdlrP35951 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LdlrP35951 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LdlrP35951 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LdlrP35951 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
LdlrP35951 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LdlrP35951 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LdlrP35951 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LdlrP35951 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms