Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TcraP01849 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TcraP01849 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
TcraP01849 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TcraP01849 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TcraP01849 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TcraP01849 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC14.99□□□□□ -0.01
TcraP01849 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TcraP01849 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TcraP01849 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TcraP01849 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TcraP01849 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
TcraP01849 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC14.98□□□□□ -0.01
TcraP01849 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TcraP01849 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TcraP01849 Snhg20-203ENSMUST00000182811 2153 ntBASIC14.98□□□□□ -0.01
TcraP01849 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TcraP01849 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TcraP01849 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TcraP01849 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TcraP01849 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TcraP01849 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
TcraP01849 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TcraP01849 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TcraP01849 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TcraP01849 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TcraP01849 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TcraP01849 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TcraP01849 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TcraP01849 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TcraP01849 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TcraP01849 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TcraP01849 Gm43403-201ENSMUST00000198011 1786 ntBASIC14.96□□□□□ -0.01
TcraP01849 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TcraP01849 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TcraP01849 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TcraP01849 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
TcraP01849 AC153911.1-201ENSMUST00000220378 758 ntBASIC14.96□□□□□ -0.01
TcraP01849 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TcraP01849 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TcraP01849 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TcraP01849 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TcraP01849 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TcraP01849 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC14.95□□□□□ -0.02
TcraP01849 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TcraP01849 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TcraP01849 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TcraP01849 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TcraP01849 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC14.95□□□□□ -0.02
TcraP01849 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TcraP01849 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TcraP01849 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC14.95□□□□□ -0.02
TcraP01849 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TcraP01849 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
TcraP01849 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
TcraP01849 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TcraP01849 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
TcraP01849 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TcraP01849 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TcraP01849 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
TcraP01849 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
TcraP01849 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TcraP01849 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
TcraP01849 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TcraP01849 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TcraP01849 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TcraP01849 AC117245.4-201ENSMUST00000217388 1646 ntBASIC14.93□□□□□ -0.02
TcraP01849 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TcraP01849 AC122317.2-201ENSMUST00000218708 1248 ntBASIC14.93□□□□□ -0.02
TcraP01849 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TcraP01849 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TcraP01849 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TcraP01849 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TcraP01849 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC14.92□□□□□ -0.02
TcraP01849 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC14.92□□□□□ -0.02
TcraP01849 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TcraP01849 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TcraP01849 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TcraP01849 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TcraP01849 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TcraP01849 Gm9812-201ENSMUST00000061934 968 ntBASIC14.92□□□□□ -0.02
TcraP01849 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TcraP01849 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
TcraP01849 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TcraP01849 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TcraP01849 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TcraP01849 Gm12818-201ENSMUST00000117562 1349 ntBASIC14.92□□□□□ -0.02
TcraP01849 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TcraP01849 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
TcraP01849 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TcraP01849 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
TcraP01849 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TcraP01849 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TcraP01849 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TcraP01849 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TcraP01849 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TcraP01849 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TcraP01849 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TcraP01849 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TcraP01849 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms