Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Slc28a2O88627 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc28a2O88627 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc28a2O88627 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Slc28a2O88627 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc28a2O88627 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.25■□□□□ 0.51
Slc28a2O88627 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.25■□□□□ 0.51
Slc28a2O88627 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc28a2O88627 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Slc28a2O88627 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc28a2O88627 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc28a2O88627 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.25■□□□□ 0.51
Slc28a2O88627 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Slc28a2O88627 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Slc28a2O88627 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.24■□□□□ 0.51
Slc28a2O88627 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Slc28a2O88627 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc28a2O88627 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.24■□□□□ 0.51
Slc28a2O88627 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc28a2O88627 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Slc28a2O88627 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc28a2O88627 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc28a2O88627 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc28a2O88627 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc28a2O88627 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc28a2O88627 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc28a2O88627 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc28a2O88627 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc28a2O88627 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.23■□□□□ 0.51
Slc28a2O88627 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Slc28a2O88627 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc28a2O88627 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc28a2O88627 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Slc28a2O88627 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc28a2O88627 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Slc28a2O88627 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc28a2O88627 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc28a2O88627 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc28a2O88627 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc28a2O88627 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Slc28a2O88627 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc28a2O88627 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc28a2O88627 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc28a2O88627 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc28a2O88627 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc28a2O88627 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.21■□□□□ 0.51
Slc28a2O88627 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc28a2O88627 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc28a2O88627 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.21■□□□□ 0.51
Slc28a2O88627 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc28a2O88627 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc28a2O88627 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc28a2O88627 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.21■□□□□ 0.51
Slc28a2O88627 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Slc28a2O88627 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Slc28a2O88627 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Slc28a2O88627 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc28a2O88627 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc28a2O88627 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Slc28a2O88627 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.2■□□□□ 0.5
Slc28a2O88627 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc28a2O88627 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc28a2O88627 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc28a2O88627 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc28a2O88627 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc28a2O88627 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Slc28a2O88627 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc28a2O88627 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Slc28a2O88627 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.19■□□□□ 0.5
Slc28a2O88627 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.19■□□□□ 0.5
Slc28a2O88627 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Slc28a2O88627 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Slc28a2O88627 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.19■□□□□ 0.5
Slc28a2O88627 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.19■□□□□ 0.5
Slc28a2O88627 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
Slc28a2O88627 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.18■□□□□ 0.5
Slc28a2O88627 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc28a2O88627 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc28a2O88627 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.18■□□□□ 0.5
Slc28a2O88627 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Slc28a2O88627 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc28a2O88627 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc28a2O88627 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc28a2O88627 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc28a2O88627 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc28a2O88627 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc28a2O88627 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc28a2O88627 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc28a2O88627 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc28a2O88627 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Slc28a2O88627 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc28a2O88627 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Slc28a2O88627 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc28a2O88627 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc28a2O88627 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Slc28a2O88627 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Slc28a2O88627 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Slc28a2O88627 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc28a2O88627 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.16■□□□□ 0.5
Slc28a2O88627 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms