Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Nespas-201ENSMUST00000143738 1083 ntBASIC19.39■□□□□ 0.69
Tnfrsf17O88472 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfrsf17O88472 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfrsf17O88472 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.39■□□□□ 0.69
Tnfrsf17O88472 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfrsf17O88472 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfrsf17O88472 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfrsf17O88472 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfrsf17O88472 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Tnfrsf17O88472 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfrsf17O88472 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfrsf17O88472 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfrsf17O88472 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfrsf17O88472 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfrsf17O88472 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfrsf17O88472 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.37■□□□□ 0.69
Tnfrsf17O88472 Gm12933-201ENSMUST00000120203 872 ntBASIC19.37■□□□□ 0.69
Tnfrsf17O88472 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.37■□□□□ 0.69
Tnfrsf17O88472 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.37■□□□□ 0.69
Tnfrsf17O88472 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfrsf17O88472 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.37■□□□□ 0.69
Tnfrsf17O88472 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfrsf17O88472 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfrsf17O88472 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfrsf17O88472 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Tnfrsf17O88472 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Tnfrsf17O88472 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfrsf17O88472 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.36■□□□□ 0.69
Tnfrsf17O88472 Gm22325-201ENSMUST00000158904 308 ntBASIC19.36■□□□□ 0.69
Tnfrsf17O88472 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfrsf17O88472 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfrsf17O88472 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.36■□□□□ 0.69
Tnfrsf17O88472 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfrsf17O88472 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Tnfrsf17O88472 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfrsf17O88472 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.35■□□□□ 0.69
Tnfrsf17O88472 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.35■□□□□ 0.69
Tnfrsf17O88472 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.35■□□□□ 0.69
Tnfrsf17O88472 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.35■□□□□ 0.69
Tnfrsf17O88472 Gm42778-201ENSMUST00000199644 553 ntBASIC19.35■□□□□ 0.69
Tnfrsf17O88472 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfrsf17O88472 Gm7143-201ENSMUST00000222811 859 ntBASIC19.35■□□□□ 0.69
Tnfrsf17O88472 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
Tnfrsf17O88472 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfrsf17O88472 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.35■□□□□ 0.69
Tnfrsf17O88472 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfrsf17O88472 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Tnfrsf17O88472 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfrsf17O88472 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfrsf17O88472 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfrsf17O88472 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfrsf17O88472 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfrsf17O88472 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.34■□□□□ 0.69
Tnfrsf17O88472 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.34■□□□□ 0.69
Tnfrsf17O88472 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.34■□□□□ 0.69
Tnfrsf17O88472 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Tnfrsf17O88472 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.34■□□□□ 0.69
Tnfrsf17O88472 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfrsf17O88472 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfrsf17O88472 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tnfrsf17O88472 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tnfrsf17O88472 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tnfrsf17O88472 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Tnfrsf17O88472 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tnfrsf17O88472 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tnfrsf17O88472 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tnfrsf17O88472 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Tnfrsf17O88472 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tnfrsf17O88472 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tnfrsf17O88472 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfrsf17O88472 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfrsf17O88472 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Tnfrsf17O88472 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.32■□□□□ 0.68
Tnfrsf17O88472 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.32■□□□□ 0.68
Tnfrsf17O88472 Smad6-203ENSMUST00000179458 273 ntBASIC19.32■□□□□ 0.68
Tnfrsf17O88472 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfrsf17O88472 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.32■□□□□ 0.68
Tnfrsf17O88472 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfrsf17O88472 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfrsf17O88472 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfrsf17O88472 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.31■□□□□ 0.68
Tnfrsf17O88472 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfrsf17O88472 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfrsf17O88472 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.31■□□□□ 0.68
Tnfrsf17O88472 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Tnfrsf17O88472 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf17O88472 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf17O88472 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.3■□□□□ 0.68
Tnfrsf17O88472 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.3■□□□□ 0.68
Tnfrsf17O88472 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Tnfrsf17O88472 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf17O88472 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf17O88472 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.29■□□□□ 0.68
Tnfrsf17O88472 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.29■□□□□ 0.68
Tnfrsf17O88472 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfrsf17O88472 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.29■□□□□ 0.68
Tnfrsf17O88472 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.29■□□□□ 0.68
Tnfrsf17O88472 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.29■□□□□ 0.68
Tnfrsf17O88472 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfrsf17O88472 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms