Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Gm3543D3Z235 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Gm3543D3Z235 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Gm3543D3Z235 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm3543D3Z235 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm3543D3Z235 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm3543D3Z235 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm3543D3Z235 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm3543D3Z235 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm3543D3Z235 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Gm3543D3Z235 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm3543D3Z235 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm3543D3Z235 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Gm3543D3Z235 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm3543D3Z235 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm3543D3Z235 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm3543D3Z235 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm3543D3Z235 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm3543D3Z235 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gm3543D3Z235 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm3543D3Z235 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.59■□□□□ 0.57
Gm3543D3Z235 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.59■□□□□ 0.57
Gm3543D3Z235 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm3543D3Z235 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm3543D3Z235 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm3543D3Z235 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm3543D3Z235 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.58■□□□□ 0.57
Gm3543D3Z235 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm3543D3Z235 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm3543D3Z235 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm3543D3Z235 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Gm3543D3Z235 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.58■□□□□ 0.56
Gm3543D3Z235 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Gm3543D3Z235 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.58■□□□□ 0.56
Gm3543D3Z235 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.58■□□□□ 0.56
Gm3543D3Z235 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm3543D3Z235 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm3543D3Z235 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm3543D3Z235 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm3543D3Z235 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm3543D3Z235 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm3543D3Z235 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm3543D3Z235 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Gm3543D3Z235 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.57■□□□□ 0.56
Gm3543D3Z235 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.57■□□□□ 0.56
Gm3543D3Z235 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.57■□□□□ 0.56
Gm3543D3Z235 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm3543D3Z235 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gm3543D3Z235 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Gm3543D3Z235 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm3543D3Z235 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Gm3543D3Z235 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.56■□□□□ 0.56
Gm3543D3Z235 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.56■□□□□ 0.56
Gm3543D3Z235 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm3543D3Z235 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm3543D3Z235 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3543D3Z235 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3543D3Z235 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Gm3543D3Z235 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3543D3Z235 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3543D3Z235 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3543D3Z235 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3543D3Z235 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3543D3Z235 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.55■□□□□ 0.56
Gm3543D3Z235 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Gm3543D3Z235 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3543D3Z235 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3543D3Z235 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3543D3Z235 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3543D3Z235 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3543D3Z235 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3543D3Z235 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3543D3Z235 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Gm3543D3Z235 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3543D3Z235 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3543D3Z235 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3543D3Z235 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Gm3543D3Z235 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3543D3Z235 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Gm3543D3Z235 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Gm3543D3Z235 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3543D3Z235 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3543D3Z235 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm3543D3Z235 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm3543D3Z235 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Gm3543D3Z235 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Gm3543D3Z235 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm3543D3Z235 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.53■□□□□ 0.56
Gm3543D3Z235 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gm3543D3Z235 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm3543D3Z235 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm3543D3Z235 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm3543D3Z235 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Gm3543D3Z235 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.52■□□□□ 0.56
Gm3543D3Z235 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Gm3543D3Z235 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
Gm3543D3Z235 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Gm3543D3Z235 Gm22238-201ENSMUST00000175222 88 ntBASIC18.52■□□□□ 0.56
Gm3543D3Z235 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Gm3543D3Z235 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms