Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Igkv3-5A0A140T8M6 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Igkv3-5A0A140T8M6 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Igkv3-5A0A140T8M6 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Igkv3-5A0A140T8M6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Igkv3-5A0A140T8M6 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Igkv3-5A0A140T8M6 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Igkv3-5A0A140T8M6 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Igkv3-5A0A140T8M6 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Igkv3-5A0A140T8M6 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Igkv3-5A0A140T8M6 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Igkv3-5A0A140T8M6 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Igkv3-5A0A140T8M6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igkv3-5A0A140T8M6 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igkv3-5A0A140T8M6 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Igkv3-5A0A140T8M6 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igkv3-5A0A140T8M6 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igkv3-5A0A140T8M6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igkv3-5A0A140T8M6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igkv3-5A0A140T8M6 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Igkv3-5A0A140T8M6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igkv3-5A0A140T8M6 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv3-5A0A140T8M6 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv3-5A0A140T8M6 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv3-5A0A140T8M6 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv3-5A0A140T8M6 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv3-5A0A140T8M6 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv3-5A0A140T8M6 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv3-5A0A140T8M6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv3-5A0A140T8M6 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv3-5A0A140T8M6 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC13□□□□□ -0.33
Igkv3-5A0A140T8M6 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13□□□□□ -0.33
Igkv3-5A0A140T8M6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC13□□□□□ -0.33
Igkv3-5A0A140T8M6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC13□□□□□ -0.33
Igkv3-5A0A140T8M6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC13□□□□□ -0.33
Igkv3-5A0A140T8M6 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv3-5A0A140T8M6 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv3-5A0A140T8M6 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv3-5A0A140T8M6 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv3-5A0A140T8M6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv3-5A0A140T8M6 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv3-5A0A140T8M6 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv3-5A0A140T8M6 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv3-5A0A140T8M6 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv3-5A0A140T8M6 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv3-5A0A140T8M6 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Igkv3-5A0A140T8M6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Igkv3-5A0A140T8M6 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv3-5A0A140T8M6 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Igkv3-5A0A140T8M6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC12.99□□□□□ -0.33
Igkv3-5A0A140T8M6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Igkv3-5A0A140T8M6 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv3-5A0A140T8M6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv3-5A0A140T8M6 Gm32051-202ENSMUST00000197905 2385 ntBASIC12.99□□□□□ -0.33
Igkv3-5A0A140T8M6 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv3-5A0A140T8M6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC12.98□□□□□ -0.33
Igkv3-5A0A140T8M6 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igkv3-5A0A140T8M6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igkv3-5A0A140T8M6 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igkv3-5A0A140T8M6 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igkv3-5A0A140T8M6 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Igkv3-5A0A140T8M6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Igkv3-5A0A140T8M6 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igkv3-5A0A140T8M6 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Igkv3-5A0A140T8M6 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igkv3-5A0A140T8M6 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Igkv3-5A0A140T8M6 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Igkv3-5A0A140T8M6 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igkv3-5A0A140T8M6 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igkv3-5A0A140T8M6 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC12.97□□□□□ -0.33
Igkv3-5A0A140T8M6 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC12.97□□□□□ -0.33
Igkv3-5A0A140T8M6 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Igkv3-5A0A140T8M6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC12.97□□□□□ -0.33
Igkv3-5A0A140T8M6 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Igkv3-5A0A140T8M6 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Igkv3-5A0A140T8M6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC12.97□□□□□ -0.33
Igkv3-5A0A140T8M6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC12.97□□□□□ -0.33
Igkv3-5A0A140T8M6 Gm27502-201ENSMUST00000183495 199 ntBASIC12.97□□□□□ -0.33
Igkv3-5A0A140T8M6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC12.97□□□□□ -0.33
Igkv3-5A0A140T8M6 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Igkv3-5A0A140T8M6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Igkv3-5A0A140T8M6 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC12.97□□□□□ -0.33
Igkv3-5A0A140T8M6 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Igkv3-5A0A140T8M6 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Igkv3-5A0A140T8M6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Igkv3-5A0A140T8M6 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Igkv3-5A0A140T8M6 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Igkv3-5A0A140T8M6 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Igkv3-5A0A140T8M6 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Igkv3-5A0A140T8M6 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Igkv3-5A0A140T8M6 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Igkv3-5A0A140T8M6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Igkv3-5A0A140T8M6 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Igkv3-5A0A140T8M6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Igkv3-5A0A140T8M6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Igkv3-5A0A140T8M6 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Igkv3-5A0A140T8M6 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Igkv3-5A0A140T8M6 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Igkv3-5A0A140T8M6 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Igkv3-5A0A140T8M6 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms