Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC15.5■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC15.5■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav3n-3A0A0G2JEM0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.47■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trav3n-3A0A0G2JEM0 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav3n-3A0A0G2JEM0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Gm44428-201ENSMUST00000204474 874 ntBASIC15.46■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav3n-3A0A0G2JEM0 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.46■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trav3n-3A0A0G2JEM0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC15.45■□□□□ 0.06
Trav3n-3A0A0G2JEM0 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav3n-3A0A0G2JEM0 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC15.42■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav3n-3A0A0G2JEM0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms