Protein–RNA interactions for Protein: A0A087WSK7

Gm28778, Predicted gene 28778 (Fragment), mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28778A0A087WSK7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28778A0A087WSK7 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC16.83■□□□□ 0.28
Gm28778A0A087WSK7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28778A0A087WSK7 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
Gm28778A0A087WSK7 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28778A0A087WSK7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28778A0A087WSK7 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28778A0A087WSK7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28778A0A087WSK7 Gm14117-201ENSMUST00000122417 843 ntBASIC16.82■□□□□ 0.28
Gm28778A0A087WSK7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.82■□□□□ 0.28
Gm28778A0A087WSK7 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28778A0A087WSK7 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Gm28778A0A087WSK7 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28778A0A087WSK7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28778A0A087WSK7 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.81■□□□□ 0.28
Gm28778A0A087WSK7 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28778A0A087WSK7 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28778A0A087WSK7 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28778A0A087WSK7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.81■□□□□ 0.28
Gm28778A0A087WSK7 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC16.81■□□□□ 0.28
Gm28778A0A087WSK7 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28778A0A087WSK7 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28778A0A087WSK7 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Gm28778A0A087WSK7 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28778A0A087WSK7 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28778A0A087WSK7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28778A0A087WSK7 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28778A0A087WSK7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28778A0A087WSK7 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28778A0A087WSK7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Gm28778A0A087WSK7 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.8■□□□□ 0.28
Gm28778A0A087WSK7 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Gm28778A0A087WSK7 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28778A0A087WSK7 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28778A0A087WSK7 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28778A0A087WSK7 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Gm28778A0A087WSK7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28778A0A087WSK7 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28778A0A087WSK7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28778A0A087WSK7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28778A0A087WSK7 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Gm28778A0A087WSK7 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28778A0A087WSK7 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28778A0A087WSK7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Gm28778A0A087WSK7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.79■□□□□ 0.28
Gm28778A0A087WSK7 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28778A0A087WSK7 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28778A0A087WSK7 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28778A0A087WSK7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28778A0A087WSK7 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Gm28778A0A087WSK7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28778A0A087WSK7 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm28778A0A087WSK7 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm28778A0A087WSK7 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm28778A0A087WSK7 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.77■□□□□ 0.28
Gm28778A0A087WSK7 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Gm28778A0A087WSK7 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gm28778A0A087WSK7 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gm28778A0A087WSK7 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm28778A0A087WSK7 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Gm28778A0A087WSK7 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Gm28778A0A087WSK7 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm28778A0A087WSK7 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm28778A0A087WSK7 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm28778A0A087WSK7 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm28778A0A087WSK7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Gm28778A0A087WSK7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm28778A0A087WSK7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm28778A0A087WSK7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm28778A0A087WSK7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm28778A0A087WSK7 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm28778A0A087WSK7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Gm28778A0A087WSK7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm28778A0A087WSK7 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm28778A0A087WSK7 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Gm28778A0A087WSK7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.75■□□□□ 0.27
Gm28778A0A087WSK7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm28778A0A087WSK7 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Gm28778A0A087WSK7 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Gm28778A0A087WSK7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
Gm28778A0A087WSK7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28778A0A087WSK7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.74■□□□□ 0.27
Gm28778A0A087WSK7 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28778A0A087WSK7 Gm22238-201ENSMUST00000175222 88 ntBASIC16.74■□□□□ 0.27
Gm28778A0A087WSK7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.74■□□□□ 0.27
Gm28778A0A087WSK7 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28778A0A087WSK7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.73■□□□□ 0.27
Gm28778A0A087WSK7 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.73■□□□□ 0.27
Gm28778A0A087WSK7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Gm28778A0A087WSK7 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm28778A0A087WSK7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm28778A0A087WSK7 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.72■□□□□ 0.27
Gm28778A0A087WSK7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Gm28778A0A087WSK7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm28778A0A087WSK7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.72■□□□□ 0.27
Gm28778A0A087WSK7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.72■□□□□ 0.27
Gm28778A0A087WSK7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm28778A0A087WSK7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.72■□□□□ 0.27
Gm28778A0A087WSK7 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Gm28778A0A087WSK7 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms