Protein–RNA interactions for Protein: A0A075B5W5

Ighv1-54, Immunoglobulin heavy variable V1-54 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-54A0A075B5W5 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv1-54A0A075B5W5 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Ighv1-54A0A075B5W5 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv1-54A0A075B5W5 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv1-54A0A075B5W5 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Ighv1-54A0A075B5W5 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv1-54A0A075B5W5 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv1-54A0A075B5W5 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv1-54A0A075B5W5 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.49■□□□□ 0.55
Ighv1-54A0A075B5W5 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv1-54A0A075B5W5 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv1-54A0A075B5W5 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv1-54A0A075B5W5 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ighv1-54A0A075B5W5 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ighv1-54A0A075B5W5 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ighv1-54A0A075B5W5 Gm45102-201ENSMUST00000207427 857 ntBASIC18.48■□□□□ 0.55
Ighv1-54A0A075B5W5 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.48■□□□□ 0.55
Ighv1-54A0A075B5W5 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Ighv1-54A0A075B5W5 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ighv1-54A0A075B5W5 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ighv1-54A0A075B5W5 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-54A0A075B5W5 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-54A0A075B5W5 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-54A0A075B5W5 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-54A0A075B5W5 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.47■□□□□ 0.55
Ighv1-54A0A075B5W5 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Ighv1-54A0A075B5W5 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-54A0A075B5W5 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-54A0A075B5W5 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-54A0A075B5W5 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv1-54A0A075B5W5 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv1-54A0A075B5W5 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv1-54A0A075B5W5 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Ighv1-54A0A075B5W5 Rps24-207ENSMUST00000224568 714 ntBASIC18.46■□□□□ 0.55
Ighv1-54A0A075B5W5 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv1-54A0A075B5W5 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv1-54A0A075B5W5 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv1-54A0A075B5W5 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv1-54A0A075B5W5 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv1-54A0A075B5W5 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv1-54A0A075B5W5 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.46■□□□□ 0.54
Ighv1-54A0A075B5W5 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.45■□□□□ 0.54
Ighv1-54A0A075B5W5 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Ighv1-54A0A075B5W5 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Ighv1-54A0A075B5W5 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ighv1-54A0A075B5W5 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ighv1-54A0A075B5W5 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ighv1-54A0A075B5W5 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.45■□□□□ 0.54
Ighv1-54A0A075B5W5 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ighv1-54A0A075B5W5 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ighv1-54A0A075B5W5 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Ighv1-54A0A075B5W5 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv1-54A0A075B5W5 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv1-54A0A075B5W5 Gm14117-201ENSMUST00000122417 843 ntBASIC18.44■□□□□ 0.54
Ighv1-54A0A075B5W5 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv1-54A0A075B5W5 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv1-54A0A075B5W5 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
Ighv1-54A0A075B5W5 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ighv1-54A0A075B5W5 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ighv1-54A0A075B5W5 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ighv1-54A0A075B5W5 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ighv1-54A0A075B5W5 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ighv1-54A0A075B5W5 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ighv1-54A0A075B5W5 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ighv1-54A0A075B5W5 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ighv1-54A0A075B5W5 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.42■□□□□ 0.54
Ighv1-54A0A075B5W5 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ighv1-54A0A075B5W5 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Ighv1-54A0A075B5W5 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
Ighv1-54A0A075B5W5 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ighv1-54A0A075B5W5 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ighv1-54A0A075B5W5 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ighv1-54A0A075B5W5 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv1-54A0A075B5W5 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.41■□□□□ 0.54
Ighv1-54A0A075B5W5 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv1-54A0A075B5W5 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv1-54A0A075B5W5 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.41■□□□□ 0.54
Ighv1-54A0A075B5W5 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv1-54A0A075B5W5 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv1-54A0A075B5W5 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-54A0A075B5W5 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-54A0A075B5W5 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-54A0A075B5W5 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Ighv1-54A0A075B5W5 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-54A0A075B5W5 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-54A0A075B5W5 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-54A0A075B5W5 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-54A0A075B5W5 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-54A0A075B5W5 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-54A0A075B5W5 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-54A0A075B5W5 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-54A0A075B5W5 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-54A0A075B5W5 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-54A0A075B5W5 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-54A0A075B5W5 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ighv1-54A0A075B5W5 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ighv1-54A0A075B5W5 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.39■□□□□ 0.53
Ighv1-54A0A075B5W5 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ighv1-54A0A075B5W5 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ighv1-54A0A075B5W5 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms