Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC23.23■■□□□ 1.31
VPS8Q8N3P4 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC23.23■■□□□ 1.31
VPS8Q8N3P4 AC012441.2-201ENST00000444843 739 ntBASIC23.23■■□□□ 1.31
VPS8Q8N3P4 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
VPS8Q8N3P4 RPL18P13-201ENST00000478088 569 ntBASIC23.23■■□□□ 1.31
VPS8Q8N3P4 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC23.23■■□□□ 1.31
VPS8Q8N3P4 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC23.23■■□□□ 1.31
VPS8Q8N3P4 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC23.23■■□□□ 1.31
VPS8Q8N3P4 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC23.23■■□□□ 1.31
VPS8Q8N3P4 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
VPS8Q8N3P4 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC23.23■■□□□ 1.31
VPS8Q8N3P4 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
VPS8Q8N3P4 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
VPS8Q8N3P4 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC23.23■■□□□ 1.31
VPS8Q8N3P4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC23.23■■□□□ 1.31
VPS8Q8N3P4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
VPS8Q8N3P4 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC23.22■■□□□ 1.31
VPS8Q8N3P4 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
VPS8Q8N3P4 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
VPS8Q8N3P4 AC009093.10-201ENST00000641956 1442 ntBASIC23.22■■□□□ 1.31
VPS8Q8N3P4 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
VPS8Q8N3P4 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
VPS8Q8N3P4 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
VPS8Q8N3P4 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
VPS8Q8N3P4 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC23.22■■□□□ 1.31
VPS8Q8N3P4 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC23.22■■□□□ 1.31
VPS8Q8N3P4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
VPS8Q8N3P4 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
VPS8Q8N3P4 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
VPS8Q8N3P4 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
VPS8Q8N3P4 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC23.22■■□□□ 1.31
VPS8Q8N3P4 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
VPS8Q8N3P4 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC23.22■■□□□ 1.31
VPS8Q8N3P4 R3HDM2P2-201ENST00000401880 2116 ntBASIC23.22■■□□□ 1.31
VPS8Q8N3P4 CALR4P-201ENST00000431943 946 ntBASIC23.22■■□□□ 1.31
VPS8Q8N3P4 AL035414.1-201ENST00000451327 857 ntBASIC23.22■■□□□ 1.31
VPS8Q8N3P4 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC23.22■■□□□ 1.31
VPS8Q8N3P4 AC106794.1-201ENST00000506935 792 ntBASIC23.22■■□□□ 1.31
VPS8Q8N3P4 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
VPS8Q8N3P4 AC009779.1-201ENST00000551138 283 ntBASIC23.22■■□□□ 1.31
VPS8Q8N3P4 AC020914.3-201ENST00000594712 304 ntBASIC23.22■■□□□ 1.31
VPS8Q8N3P4 AC090164.2-201ENST00000611487 516 ntBASIC23.22■■□□□ 1.31
VPS8Q8N3P4 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
VPS8Q8N3P4 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
VPS8Q8N3P4 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
VPS8Q8N3P4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
VPS8Q8N3P4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
VPS8Q8N3P4 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
VPS8Q8N3P4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
VPS8Q8N3P4 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
VPS8Q8N3P4 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
VPS8Q8N3P4 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
VPS8Q8N3P4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
VPS8Q8N3P4 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
VPS8Q8N3P4 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
VPS8Q8N3P4 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
VPS8Q8N3P4 AC006504.5-208ENST00000588784 2401 ntBASIC23.21■■□□□ 1.31
VPS8Q8N3P4 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
VPS8Q8N3P4 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC23.21■■□□□ 1.31
VPS8Q8N3P4 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
VPS8Q8N3P4 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
VPS8Q8N3P4 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC23.21■■□□□ 1.31
VPS8Q8N3P4 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
VPS8Q8N3P4 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
VPS8Q8N3P4 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC23.21■■□□□ 1.31
VPS8Q8N3P4 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
VPS8Q8N3P4 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC23.21■■□□□ 1.31
VPS8Q8N3P4 EID1-202ENST00000560490 584 ntTSL 3 BASIC23.21■■□□□ 1.31
VPS8Q8N3P4 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
VPS8Q8N3P4 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC23.21■■□□□ 1.31
VPS8Q8N3P4 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC23.21■■□□□ 1.31
VPS8Q8N3P4 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
VPS8Q8N3P4 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
VPS8Q8N3P4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
VPS8Q8N3P4 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC23.21■■□□□ 1.31
VPS8Q8N3P4 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
VPS8Q8N3P4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
VPS8Q8N3P4 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
VPS8Q8N3P4 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
VPS8Q8N3P4 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
VPS8Q8N3P4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
VPS8Q8N3P4 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
VPS8Q8N3P4 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
VPS8Q8N3P4 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.31
VPS8Q8N3P4 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC23.2■■□□□ 1.31
VPS8Q8N3P4 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.31
VPS8Q8N3P4 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
VPS8Q8N3P4 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
VPS8Q8N3P4 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC23.2■■□□□ 1.3
VPS8Q8N3P4 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC23.2■■□□□ 1.3
VPS8Q8N3P4 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
VPS8Q8N3P4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
VPS8Q8N3P4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC23.2■■□□□ 1.3
VPS8Q8N3P4 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
VPS8Q8N3P4 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
VPS8Q8N3P4 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC23.2■■□□□ 1.3
VPS8Q8N3P4 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
VPS8Q8N3P4 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
VPS8Q8N3P4 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
VPS8Q8N3P4 DEF8-202ENST00000418391 852 ntTSL 2 BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms