Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pabpn1Q8CCS6 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pabpn1Q8CCS6 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pabpn1Q8CCS6 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pabpn1Q8CCS6 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pabpn1Q8CCS6 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pabpn1Q8CCS6 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pabpn1Q8CCS6 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pabpn1Q8CCS6 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pabpn1Q8CCS6 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Pabpn1Q8CCS6 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pabpn1Q8CCS6 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pabpn1Q8CCS6 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pabpn1Q8CCS6 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pabpn1Q8CCS6 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pabpn1Q8CCS6 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pabpn1Q8CCS6 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pabpn1Q8CCS6 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pabpn1Q8CCS6 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pabpn1Q8CCS6 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pabpn1Q8CCS6 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pabpn1Q8CCS6 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pabpn1Q8CCS6 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pabpn1Q8CCS6 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC18.24■□□□□ 0.51
Pabpn1Q8CCS6 Gm25343-201ENSMUST00000157460 107 ntBASIC18.24■□□□□ 0.51
Pabpn1Q8CCS6 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Pabpn1Q8CCS6 Mir6934-201ENSMUST00000183965 62 ntBASIC18.24■□□□□ 0.51
Pabpn1Q8CCS6 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC18.24■□□□□ 0.51
Pabpn1Q8CCS6 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC18.24■□□□□ 0.51
Pabpn1Q8CCS6 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC18.24■□□□□ 0.51
Pabpn1Q8CCS6 Gm5040-201ENSMUST00000218609 800 ntBASIC18.24■□□□□ 0.51
Pabpn1Q8CCS6 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pabpn1Q8CCS6 Cbx3-ps5-201ENSMUST00000091545 544 ntBASIC18.24■□□□□ 0.51
Pabpn1Q8CCS6 Gm5507-201ENSMUST00000091897 1008 ntBASIC18.24■□□□□ 0.51
Pabpn1Q8CCS6 Gm4778-201ENSMUST00000098878 1098 ntBASIC18.24■□□□□ 0.51
Pabpn1Q8CCS6 Cbx3-ps2-201ENSMUST00000099421 544 ntBASIC18.24■□□□□ 0.51
Pabpn1Q8CCS6 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC18.24■□□□□ 0.51
Pabpn1Q8CCS6 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pabpn1Q8CCS6 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pabpn1Q8CCS6 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pabpn1Q8CCS6 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pabpn1Q8CCS6 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pabpn1Q8CCS6 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pabpn1Q8CCS6 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pabpn1Q8CCS6 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pabpn1Q8CCS6 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pabpn1Q8CCS6 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Gm26943-201ENSMUST00000182295 957 ntBASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Gm9192-201ENSMUST00000183221 985 ntBASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Gm19918-201ENSMUST00000194858 400 ntBASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Gm18391-201ENSMUST00000217189 658 ntBASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Gm18042-201ENSMUST00000219887 790 ntBASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Gm5194-201ENSMUST00000221457 742 ntBASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 AC153153.1-201ENSMUST00000225803 793 ntBASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Gm9701-201ENSMUST00000077976 427 ntBASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Gm16477-201ENSMUST00000085365 801 ntBASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Gm17415-201ENSMUST00000096427 789 ntBASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Gm44740-201ENSMUST00000205603 1614 ntBASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pabpn1Q8CCS6 Gm6189-201ENSMUST00000164487 2082 ntBASIC18.22■□□□□ 0.51
Pabpn1Q8CCS6 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pabpn1Q8CCS6 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pabpn1Q8CCS6 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pabpn1Q8CCS6 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pabpn1Q8CCS6 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pabpn1Q8CCS6 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pabpn1Q8CCS6 Gm6758-201ENSMUST00000119643 1055 ntBASIC18.22■□□□□ 0.51
Pabpn1Q8CCS6 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms