Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 n-R5s84-201ENSMUST00000122591 109 ntBASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Gm22146-201ENSMUST00000157397 288 ntBASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Gm11405-201ENSMUST00000118689 1556 ntBASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a6Q8C6K9 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.83□□□□□ -0.67
Col6a6Q8C6K9 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
Col6a6Q8C6K9 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Gm12164-201ENSMUST00000121695 551 ntBASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Gm45592-201ENSMUST00000209605 1043 ntBASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 AC129308.3-201ENSMUST00000225652 524 ntBASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Gm13022-201ENSMUST00000121181 285 ntBASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col6a6Q8C6K9 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Gm11660-201ENSMUST00000120955 412 ntBASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Gm14760-201ENSMUST00000121831 999 ntBASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Gm19587-201ENSMUST00000191395 545 ntBASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms