Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc40Q8BI79 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Gm11793-201ENSMUST00000120433 981 ntBASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Gm8062-201ENSMUST00000139696 444 ntBASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Gm38158-201ENSMUST00000194617 339 ntBASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Gm45880-201ENSMUST00000213041 853 ntBASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc40Q8BI79 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Gm12742-201ENSMUST00000117326 410 ntBASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Gm12957-201ENSMUST00000117835 377 ntBASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Gm13875-201ENSMUST00000120162 282 ntBASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Gm13570-201ENSMUST00000140763 309 ntBASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms