Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Snrnp40Q6PE01 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Gm11980-201ENSMUST00000121445 986 ntBASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Gm7150-201ENSMUST00000122032 981 ntBASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Gm9116-201ENSMUST00000192400 1018 ntBASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Gm6108-201ENSMUST00000208365 367 ntBASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 AC159376.1-201ENSMUST00000218504 630 ntBASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 AC154747.3-201ENSMUST00000224471 3470 ntBASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Snrnp40Q6PE01 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Gm42928-201ENSMUST00000197338 3339 ntBASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Gm5706-201ENSMUST00000181525 993 ntBASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Gm4034-201ENSMUST00000187674 480 ntBASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Gm35713-201ENSMUST00000210516 199 ntBASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 AC165154.1-201ENSMUST00000226661 340 ntBASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms