Protein–RNA interactions for Protein: P06728

Apoa4, Apolipoprotein A-IV, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoa4P06728 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.82□□□□□ -0.52
Apoa4P06728 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.82□□□□□ -0.52
Apoa4P06728 Gm37424-201ENSMUST00000191727 561 ntBASIC11.82□□□□□ -0.52
Apoa4P06728 Gm38002-201ENSMUST00000193255 180 ntBASIC11.82□□□□□ -0.52
Apoa4P06728 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Apoa4P06728 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Apoa4P06728 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.82□□□□□ -0.52
Apoa4P06728 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.82□□□□□ -0.52
Apoa4P06728 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Apoa4P06728 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Apoa4P06728 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Apoa4P06728 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Apoa4P06728 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Apoa4P06728 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Apoa4P06728 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Apoa4P06728 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.82□□□□□ -0.52
Apoa4P06728 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Apoa4P06728 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Apoa4P06728 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Apoa4P06728 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Apoa4P06728 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Apoa4P06728 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Apoa4P06728 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.82□□□□□ -0.52
Apoa4P06728 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Apoa4P06728 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Apoa4P06728 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Apoa4P06728 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Apoa4P06728 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.81□□□□□ -0.52
Apoa4P06728 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Apoa4P06728 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Apoa4P06728 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Apoa4P06728 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Apoa4P06728 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Apoa4P06728 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Apoa4P06728 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Apoa4P06728 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Apoa4P06728 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Apoa4P06728 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Apoa4P06728 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Apoa4P06728 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Apoa4P06728 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.81□□□□□ -0.52
Apoa4P06728 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.81□□□□□ -0.52
Apoa4P06728 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.81□□□□□ -0.52
Apoa4P06728 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.81□□□□□ -0.52
Apoa4P06728 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Apoa4P06728 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Apoa4P06728 AY702102-202ENSMUST00000194651 1173 ntBASIC11.81□□□□□ -0.52
Apoa4P06728 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Apoa4P06728 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.81□□□□□ -0.52
Apoa4P06728 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Apoa4P06728 Gm19309-201ENSMUST00000218295 205 ntBASIC11.81□□□□□ -0.52
Apoa4P06728 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.81□□□□□ -0.52
Apoa4P06728 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Apoa4P06728 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Apoa4P06728 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Apoa4P06728 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Apoa4P06728 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Apoa4P06728 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Apoa4P06728 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.81□□□□□ -0.52
Apoa4P06728 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Apoa4P06728 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Apoa4P06728 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Apoa4P06728 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Apoa4P06728 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Apoa4P06728 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Apoa4P06728 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Apoa4P06728 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.81□□□□□ -0.52
Apoa4P06728 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Apoa4P06728 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Apoa4P06728 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Apoa4P06728 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.8□□□□□ -0.52
Apoa4P06728 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.8□□□□□ -0.52
Apoa4P06728 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.8□□□□□ -0.52
Apoa4P06728 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.8□□□□□ -0.52
Apoa4P06728 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Apoa4P06728 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Apoa4P06728 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Apoa4P06728 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Apoa4P06728 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Apoa4P06728 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Apoa4P06728 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Apoa4P06728 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Apoa4P06728 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Apoa4P06728 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Apoa4P06728 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Apoa4P06728 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Apoa4P06728 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Apoa4P06728 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Apoa4P06728 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Apoa4P06728 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Apoa4P06728 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.8□□□□□ -0.52
Apoa4P06728 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.8□□□□□ -0.52
Apoa4P06728 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.8□□□□□ -0.52
Apoa4P06728 Gm42937-201ENSMUST00000197360 752 ntBASIC11.8□□□□□ -0.52
Apoa4P06728 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.8□□□□□ -0.52
Apoa4P06728 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.8□□□□□ -0.52
Apoa4P06728 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Apoa4P06728 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Apoa4P06728 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Apoa4P06728 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms