Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.93□□□□□ -0.66
Gm3543D3Z235 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3543D3Z235 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3543D3Z235 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3543D3Z235 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.93□□□□□ -0.66
Gm3543D3Z235 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.93□□□□□ -0.66
Gm3543D3Z235 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Gm3543D3Z235 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.93□□□□□ -0.66
Gm3543D3Z235 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.93□□□□□ -0.66
Gm3543D3Z235 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Gm3543D3Z235 Gm24231-201ENSMUST00000104315 133 ntBASIC10.93□□□□□ -0.66
Gm3543D3Z235 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3543D3Z235 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3543D3Z235 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3543D3Z235 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Gm3543D3Z235 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3543D3Z235 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3543D3Z235 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3543D3Z235 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3543D3Z235 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC10.93□□□□□ -0.66
Gm3543D3Z235 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3543D3Z235 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3543D3Z235 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Gm3543D3Z235 Gm18304-201ENSMUST00000189162 546 ntBASIC10.93□□□□□ -0.66
Gm3543D3Z235 Rprl1-202ENSMUST00000198476 238 ntBASIC10.93□□□□□ -0.66
Gm3543D3Z235 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC10.93□□□□□ -0.66
Gm3543D3Z235 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC10.93□□□□□ -0.66
Gm3543D3Z235 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3543D3Z235 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3543D3Z235 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3543D3Z235 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3543D3Z235 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3543D3Z235 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.93□□□□□ -0.66
Gm3543D3Z235 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.93□□□□□ -0.66
Gm3543D3Z235 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3543D3Z235 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Gm3543D3Z235 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3543D3Z235 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3543D3Z235 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Gm3543D3Z235 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3543D3Z235 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3543D3Z235 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3543D3Z235 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3543D3Z235 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.92□□□□□ -0.66
Gm3543D3Z235 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.92□□□□□ -0.66
Gm3543D3Z235 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Gm3543D3Z235 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3543D3Z235 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3543D3Z235 Gm13296-201ENSMUST00000117854 997 ntBASIC10.92□□□□□ -0.66
Gm3543D3Z235 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3543D3Z235 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3543D3Z235 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3543D3Z235 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.92□□□□□ -0.66
Gm3543D3Z235 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3543D3Z235 Gm37466-201ENSMUST00000195692 652 ntBASIC10.92□□□□□ -0.66
Gm3543D3Z235 Gm44958-201ENSMUST00000203734 736 ntBASIC10.92□□□□□ -0.66
Gm3543D3Z235 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.92□□□□□ -0.66
Gm3543D3Z235 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.92□□□□□ -0.66
Gm3543D3Z235 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3543D3Z235 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3543D3Z235 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3543D3Z235 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3543D3Z235 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3543D3Z235 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3543D3Z235 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3543D3Z235 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3543D3Z235 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3543D3Z235 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3543D3Z235 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3543D3Z235 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3543D3Z235 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3543D3Z235 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Gm3543D3Z235 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.92□□□□□ -0.66
Gm3543D3Z235 Gm43908-201ENSMUST00000205074 1472 ntBASIC10.92□□□□□ -0.66
Gm3543D3Z235 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3543D3Z235 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3543D3Z235 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3543D3Z235 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3543D3Z235 Gm5846-201ENSMUST00000193146 1414 ntBASIC10.92□□□□□ -0.66
Gm3543D3Z235 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3543D3Z235 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3543D3Z235 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3543D3Z235 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm3543D3Z235 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm3543D3Z235 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.91□□□□□ -0.66
Gm3543D3Z235 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Gm3543D3Z235 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Gm3543D3Z235 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm3543D3Z235 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Gm3543D3Z235 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm3543D3Z235 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Gm3543D3Z235 Gm2606-201ENSMUST00000100754 1002 ntBASIC10.91□□□□□ -0.66
Gm3543D3Z235 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.91□□□□□ -0.66
Gm3543D3Z235 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm3543D3Z235 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Gm3543D3Z235 Gm12015-201ENSMUST00000117065 843 ntBASIC10.91□□□□□ -0.66
Gm3543D3Z235 Gm12997-201ENSMUST00000120207 640 ntBASIC10.91□□□□□ -0.66
Gm3543D3Z235 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC10.91□□□□□ -0.66
Gm3543D3Z235 Gm24845-201ENSMUST00000158034 109 ntBASIC10.91□□□□□ -0.66
Gm3543D3Z235 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms