Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 AC055811.4-201ENST00000624039 1754 ntBASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 KRT8P35-201ENST00000483942 1338 ntBASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 AL390755.1-201ENST00000623716 2027 ntBASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 MSTO2P-201ENST00000314835 1709 ntBASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 AC098614.1-201ENST00000368528 745 ntBASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 EIF3FP3-201ENST00000434851 1086 ntBASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 AC099063.4-201ENST00000641099 1602 ntBASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4E1Q9UPM8 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 RN7SL752P-201ENST00000463779 287 ntBASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 GIMAP3P-201ENST00000495150 836 ntBASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 MIR5189-201ENST00000577370 114 ntBASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 AC010319.3-201ENST00000597028 470 ntBASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4E1Q9UPM8 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.71■□□□□ 0.1
AP4E1Q9UPM8 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
AP4E1Q9UPM8 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
AP4E1Q9UPM8 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
AP4E1Q9UPM8 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.1
AP4E1Q9UPM8 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
AP4E1Q9UPM8 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.71■□□□□ 0.1
AP4E1Q9UPM8 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
AP4E1Q9UPM8 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms