Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfx3P48381 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
Rfx3P48381 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rfx3P48381 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfx3P48381 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfx3P48381 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfx3P48381 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfx3P48381 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Rfx3P48381 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfx3P48381 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.89□□□□□ -0.67
Rfx3P48381 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Rfx3P48381 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfx3P48381 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rfx3P48381 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Rfx3P48381 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rfx3P48381 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfx3P48381 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rfx3P48381 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfx3P48381 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.88□□□□□ -0.67
Rfx3P48381 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfx3P48381 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfx3P48381 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfx3P48381 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfx3P48381 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Rfx3P48381 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.88□□□□□ -0.67
Rfx3P48381 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfx3P48381 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC10.88□□□□□ -0.67
Rfx3P48381 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10.88□□□□□ -0.67
Rfx3P48381 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.88□□□□□ -0.67
Rfx3P48381 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.88□□□□□ -0.67
Rfx3P48381 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.88□□□□□ -0.67
Rfx3P48381 Gm37424-201ENSMUST00000191727 561 ntBASIC10.88□□□□□ -0.67
Rfx3P48381 Gm37201-201ENSMUST00000191845 523 ntBASIC10.88□□□□□ -0.67
Rfx3P48381 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC10.88□□□□□ -0.67
Rfx3P48381 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC10.88□□□□□ -0.67
Rfx3P48381 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.88□□□□□ -0.67
Rfx3P48381 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfx3P48381 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfx3P48381 Gm10478-201ENSMUST00000084451 396 ntBASIC10.88□□□□□ -0.67
Rfx3P48381 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfx3P48381 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Rfx3P48381 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfx3P48381 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rfx3P48381 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfx3P48381 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfx3P48381 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rfx3P48381 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.88□□□□□ -0.67
Rfx3P48381 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfx3P48381 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfx3P48381 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Rfx3P48381 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.88□□□□□ -0.67
Rfx3P48381 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfx3P48381 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfx3P48381 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfx3P48381 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Rfx3P48381 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfx3P48381 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfx3P48381 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rfx3P48381 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Rfx3P48381 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.87□□□□□ -0.67
Rfx3P48381 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfx3P48381 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfx3P48381 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rfx3P48381 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfx3P48381 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfx3P48381 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rfx3P48381 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfx3P48381 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfx3P48381 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfx3P48381 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfx3P48381 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.87□□□□□ -0.67
Rfx3P48381 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfx3P48381 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfx3P48381 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rfx3P48381 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Rfx3P48381 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Rfx3P48381 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfx3P48381 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Rfx3P48381 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rfx3P48381 Gm23119-201ENSMUST00000158610 140 ntBASIC10.87□□□□□ -0.67
Rfx3P48381 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Rfx3P48381 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfx3P48381 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.87□□□□□ -0.67
Rfx3P48381 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.87□□□□□ -0.67
Rfx3P48381 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.87□□□□□ -0.67
Rfx3P48381 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfx3P48381 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfx3P48381 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC10.87□□□□□ -0.67
Rfx3P48381 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfx3P48381 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Rfx3P48381 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfx3P48381 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfx3P48381 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfx3P48381 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfx3P48381 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfx3P48381 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfx3P48381 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfx3P48381 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfx3P48381 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfx3P48381 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms