Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Chrna4O70174 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chrna4O70174 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.13□□□□□ -0.47
Chrna4O70174 Gm4607-201ENSMUST00000206649 577 ntBASIC12.13□□□□□ -0.47
Chrna4O70174 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chrna4O70174 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.13□□□□□ -0.47
Chrna4O70174 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Chrna4O70174 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chrna4O70174 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chrna4O70174 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.13□□□□□ -0.47
Chrna4O70174 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chrna4O70174 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chrna4O70174 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chrna4O70174 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chrna4O70174 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chrna4O70174 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Chrna4O70174 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chrna4O70174 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.13□□□□□ -0.47
Chrna4O70174 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chrna4O70174 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chrna4O70174 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chrna4O70174 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.12□□□□□ -0.47
Chrna4O70174 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chrna4O70174 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chrna4O70174 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.12□□□□□ -0.47
Chrna4O70174 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chrna4O70174 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chrna4O70174 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chrna4O70174 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chrna4O70174 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chrna4O70174 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chrna4O70174 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chrna4O70174 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chrna4O70174 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chrna4O70174 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chrna4O70174 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chrna4O70174 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chrna4O70174 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chrna4O70174 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chrna4O70174 Gm13296-201ENSMUST00000117854 997 ntBASIC12.12□□□□□ -0.47
Chrna4O70174 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chrna4O70174 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.12□□□□□ -0.47
Chrna4O70174 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.12□□□□□ -0.47
Chrna4O70174 Gm25890-201ENSMUST00000177643 165 ntBASIC12.12□□□□□ -0.47
Chrna4O70174 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.12□□□□□ -0.47
Chrna4O70174 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.12□□□□□ -0.47
Chrna4O70174 Gm22614-201ENSMUST00000178300 165 ntBASIC12.12□□□□□ -0.47
Chrna4O70174 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chrna4O70174 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.12□□□□□ -0.47
Chrna4O70174 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.12□□□□□ -0.47
Chrna4O70174 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.12□□□□□ -0.47
Chrna4O70174 Gm5455-201ENSMUST00000058710 715 ntBASIC12.12□□□□□ -0.47
Chrna4O70174 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chrna4O70174 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chrna4O70174 Gm22042-201ENSMUST00000082989 165 ntBASIC12.12□□□□□ -0.47
Chrna4O70174 Gm26110-201ENSMUST00000083971 165 ntBASIC12.12□□□□□ -0.47
Chrna4O70174 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Chrna4O70174 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Chrna4O70174 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chrna4O70174 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chrna4O70174 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.12□□□□□ -0.47
Chrna4O70174 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chrna4O70174 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Chrna4O70174 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Chrna4O70174 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chrna4O70174 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chrna4O70174 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chrna4O70174 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chrna4O70174 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Chrna4O70174 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chrna4O70174 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chrna4O70174 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Chrna4O70174 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Chrna4O70174 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna4O70174 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna4O70174 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna4O70174 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna4O70174 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna4O70174 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna4O70174 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna4O70174 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna4O70174 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna4O70174 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna4O70174 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna4O70174 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna4O70174 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna4O70174 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.11□□□□□ -0.47
Chrna4O70174 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Chrna4O70174 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna4O70174 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna4O70174 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna4O70174 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Chrna4O70174 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Chrna4O70174 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Chrna4O70174 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna4O70174 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.11□□□□□ -0.47
Chrna4O70174 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna4O70174 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna4O70174 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chrna4O70174 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms