Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trdmt1O55055 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trdmt1O55055 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.24□□□□□ -0.29
Trdmt1O55055 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trdmt1O55055 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trdmt1O55055 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trdmt1O55055 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.24□□□□□ -0.29
Trdmt1O55055 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trdmt1O55055 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trdmt1O55055 Gm11783-201ENSMUST00000119549 885 ntBASIC13.24□□□□□ -0.29
Trdmt1O55055 Gm14942-201ENSMUST00000119642 336 ntBASIC13.24□□□□□ -0.29
Trdmt1O55055 Gm13937-201ENSMUST00000121000 988 ntBASIC13.24□□□□□ -0.29
Trdmt1O55055 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trdmt1O55055 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Trdmt1O55055 Gm17877-201ENSMUST00000192578 814 ntBASIC13.24□□□□□ -0.29
Trdmt1O55055 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trdmt1O55055 Gm43852-201ENSMUST00000202098 917 ntBASIC13.24□□□□□ -0.29
Trdmt1O55055 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trdmt1O55055 Gm45113-201ENSMUST00000207518 165 ntBASIC13.24□□□□□ -0.29
Trdmt1O55055 Gm3028-201ENSMUST00000213805 1119 ntBASIC13.24□□□□□ -0.29
Trdmt1O55055 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trdmt1O55055 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trdmt1O55055 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Trdmt1O55055 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.24□□□□□ -0.29
Trdmt1O55055 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.24□□□□□ -0.29
Trdmt1O55055 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Trdmt1O55055 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Trdmt1O55055 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trdmt1O55055 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.24□□□□□ -0.29
Trdmt1O55055 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trdmt1O55055 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trdmt1O55055 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trdmt1O55055 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Trdmt1O55055 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trdmt1O55055 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trdmt1O55055 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trdmt1O55055 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trdmt1O55055 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.23□□□□□ -0.29
Trdmt1O55055 Gm9796-201ENSMUST00000062249 2250 ntBASIC13.23□□□□□ -0.29
Trdmt1O55055 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trdmt1O55055 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trdmt1O55055 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.23□□□□□ -0.29
Trdmt1O55055 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trdmt1O55055 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.23□□□□□ -0.29
Trdmt1O55055 Gm26013-201ENSMUST00000104404 119 ntBASIC13.23□□□□□ -0.29
Trdmt1O55055 Gm12856-201ENSMUST00000119471 1293 ntBASIC13.23□□□□□ -0.29
Trdmt1O55055 Gm7150-201ENSMUST00000122032 981 ntBASIC13.23□□□□□ -0.29
Trdmt1O55055 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC13.23□□□□□ -0.29
Trdmt1O55055 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.23□□□□□ -0.29
Trdmt1O55055 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC13.23□□□□□ -0.29
Trdmt1O55055 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trdmt1O55055 Gm22442-201ENSMUST00000157256 144 ntBASIC13.23□□□□□ -0.29
Trdmt1O55055 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trdmt1O55055 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trdmt1O55055 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trdmt1O55055 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trdmt1O55055 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trdmt1O55055 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trdmt1O55055 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trdmt1O55055 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.23□□□□□ -0.29
Trdmt1O55055 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trdmt1O55055 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trdmt1O55055 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trdmt1O55055 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trdmt1O55055 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trdmt1O55055 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trdmt1O55055 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trdmt1O55055 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trdmt1O55055 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trdmt1O55055 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trdmt1O55055 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trdmt1O55055 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Trdmt1O55055 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdmt1O55055 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.22□□□□□ -0.29
Trdmt1O55055 AC166836.1-201ENSMUST00000219933 1795 ntBASIC13.22□□□□□ -0.29
Trdmt1O55055 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trdmt1O55055 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdmt1O55055 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trdmt1O55055 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdmt1O55055 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdmt1O55055 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdmt1O55055 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdmt1O55055 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Trdmt1O55055 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdmt1O55055 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trdmt1O55055 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdmt1O55055 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trdmt1O55055 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdmt1O55055 Gm12419-201ENSMUST00000116649 636 ntBASIC13.22□□□□□ -0.29
Trdmt1O55055 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC13.22□□□□□ -0.29
Trdmt1O55055 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC13.22□□□□□ -0.29
Trdmt1O55055 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.22□□□□□ -0.29
Trdmt1O55055 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trdmt1O55055 Gm3793-201ENSMUST00000204973 672 ntBASIC13.22□□□□□ -0.29
Trdmt1O55055 Gm9661-201ENSMUST00000221611 1122 ntBASIC13.22□□□□□ -0.29
Trdmt1O55055 CT025553.1-201ENSMUST00000226292 299 ntBASIC13.22□□□□□ -0.29
Trdmt1O55055 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdmt1O55055 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trdmt1O55055 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC13.22□□□□□ -0.29
Trdmt1O55055 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms