Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcl13O55038 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Cxcl13O55038 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcl13O55038 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.17□□□□□ -0.78
Cxcl13O55038 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Cxcl13O55038 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.17□□□□□ -0.78
Cxcl13O55038 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcl13O55038 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.17□□□□□ -0.78
Cxcl13O55038 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcl13O55038 Gm13263-201ENSMUST00000121271 838 ntBASIC10.17□□□□□ -0.78
Cxcl13O55038 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.17□□□□□ -0.78
Cxcl13O55038 Gm6397-201ENSMUST00000161973 1069 ntBASIC10.17□□□□□ -0.78
Cxcl13O55038 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.17□□□□□ -0.78
Cxcl13O55038 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcl13O55038 Gm8815-201ENSMUST00000173809 620 ntBASIC10.17□□□□□ -0.78
Cxcl13O55038 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC10.17□□□□□ -0.78
Cxcl13O55038 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.17□□□□□ -0.78
Cxcl13O55038 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.17□□□□□ -0.78
Cxcl13O55038 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC10.17□□□□□ -0.78
Cxcl13O55038 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.17□□□□□ -0.78
Cxcl13O55038 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcl13O55038 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcl13O55038 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.17□□□□□ -0.78
Cxcl13O55038 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcl13O55038 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcl13O55038 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcl13O55038 Gm7551-201ENSMUST00000089593 1074 ntBASIC10.17□□□□□ -0.78
Cxcl13O55038 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcl13O55038 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcl13O55038 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcl13O55038 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.17□□□□□ -0.78
Cxcl13O55038 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcl13O55038 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcl13O55038 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcl13O55038 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcl13O55038 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcl13O55038 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcl13O55038 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.17□□□□□ -0.78
Cxcl13O55038 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcl13O55038 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcl13O55038 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcl13O55038 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcl13O55038 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cxcl13O55038 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cxcl13O55038 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cxcl13O55038 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cxcl13O55038 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
Cxcl13O55038 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cxcl13O55038 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Cxcl13O55038 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cxcl13O55038 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cxcl13O55038 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Cxcl13O55038 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.16□□□□□ -0.78
Cxcl13O55038 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cxcl13O55038 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cxcl13O55038 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
Cxcl13O55038 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
Cxcl13O55038 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Cxcl13O55038 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cxcl13O55038 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
Cxcl13O55038 Gm15207-201ENSMUST00000119259 442 ntBASIC10.16□□□□□ -0.78
Cxcl13O55038 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cxcl13O55038 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.16□□□□□ -0.78
Cxcl13O55038 Gm4310-201ENSMUST00000177847 889 ntBASIC10.16□□□□□ -0.78
Cxcl13O55038 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.16□□□□□ -0.78
Cxcl13O55038 Gm3508-201ENSMUST00000186012 792 ntBASIC10.16□□□□□ -0.78
Cxcl13O55038 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC10.16□□□□□ -0.78
Cxcl13O55038 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Cxcl13O55038 AC125486.1-201ENSMUST00000218701 320 ntBASIC10.16□□□□□ -0.78
Cxcl13O55038 AC122408.1-201ENSMUST00000218949 218 ntBASIC10.16□□□□□ -0.78
Cxcl13O55038 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cxcl13O55038 Gm9785-201ENSMUST00000062642 1006 ntBASIC10.16□□□□□ -0.78
Cxcl13O55038 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cxcl13O55038 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Cxcl13O55038 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Cxcl13O55038 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cxcl13O55038 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cxcl13O55038 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cxcl13O55038 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cxcl13O55038 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cxcl13O55038 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cxcl13O55038 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Cxcl13O55038 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cxcl13O55038 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cxcl13O55038 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Cxcl13O55038 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cxcl13O55038 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC10.16□□□□□ -0.78
Cxcl13O55038 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Cxcl13O55038 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cxcl13O55038 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cxcl13O55038 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cxcl13O55038 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cxcl13O55038 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cxcl13O55038 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Cxcl13O55038 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cxcl13O55038 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Cxcl13O55038 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Cxcl13O55038 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cxcl13O55038 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cxcl13O55038 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms