Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Ubp1Q811S7 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.96□□□□□ -0.5
Ubp1Q811S7 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Ubp1Q811S7 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.96□□□□□ -0.5
Ubp1Q811S7 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.96□□□□□ -0.5
Ubp1Q811S7 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ubp1Q811S7 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.96□□□□□ -0.5
Ubp1Q811S7 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ubp1Q811S7 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.96□□□□□ -0.5
Ubp1Q811S7 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.95□□□□□ -0.5
Ubp1Q811S7 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Gm12015-201ENSMUST00000117065 843 ntBASIC11.95□□□□□ -0.5
Ubp1Q811S7 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Gm25890-201ENSMUST00000177643 165 ntBASIC11.95□□□□□ -0.5
Ubp1Q811S7 Gm25700-201ENSMUST00000177693 110 ntBASIC11.95□□□□□ -0.5
Ubp1Q811S7 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.95□□□□□ -0.5
Ubp1Q811S7 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.95□□□□□ -0.5
Ubp1Q811S7 Gm22614-201ENSMUST00000178300 165 ntBASIC11.95□□□□□ -0.5
Ubp1Q811S7 Gm6098-201ENSMUST00000180234 330 ntBASIC11.95□□□□□ -0.5
Ubp1Q811S7 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Gm32999-201ENSMUST00000192693 562 ntBASIC11.95□□□□□ -0.5
Ubp1Q811S7 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.95□□□□□ -0.5
Ubp1Q811S7 Gm13097-201ENSMUST00000210722 397 ntBASIC11.95□□□□□ -0.5
Ubp1Q811S7 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ubp1Q811S7 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Gm22042-201ENSMUST00000082989 165 ntBASIC11.95□□□□□ -0.5
Ubp1Q811S7 Gm26110-201ENSMUST00000083971 165 ntBASIC11.95□□□□□ -0.5
Ubp1Q811S7 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.95□□□□□ -0.5
Ubp1Q811S7 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.94□□□□□ -0.5
Ubp1Q811S7 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.94□□□□□ -0.5
Ubp1Q811S7 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Ubp1Q811S7 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubp1Q811S7 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ubp1Q811S7 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubp1Q811S7 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubp1Q811S7 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubp1Q811S7 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.94□□□□□ -0.5
Ubp1Q811S7 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ubp1Q811S7 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubp1Q811S7 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubp1Q811S7 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubp1Q811S7 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubp1Q811S7 Gm14644-201ENSMUST00000116671 647 ntBASIC11.94□□□□□ -0.5
Ubp1Q811S7 Gm13333-201ENSMUST00000119424 781 ntBASIC11.94□□□□□ -0.5
Ubp1Q811S7 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubp1Q811S7 Gm13366-201ENSMUST00000122198 970 ntBASIC11.94□□□□□ -0.5
Ubp1Q811S7 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.94□□□□□ -0.5
Ubp1Q811S7 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.94□□□□□ -0.5
Ubp1Q811S7 Rprl1-201ENSMUST00000158050 327 ntBASIC11.94□□□□□ -0.5
Ubp1Q811S7 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.94□□□□□ -0.5
Ubp1Q811S7 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.94□□□□□ -0.5
Ubp1Q811S7 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ubp1Q811S7 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ubp1Q811S7 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC11.94□□□□□ -0.5
Ubp1Q811S7 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC11.94□□□□□ -0.5
Ubp1Q811S7 Gm45224-201ENSMUST00000208203 414 ntBASIC11.94□□□□□ -0.5
Ubp1Q811S7 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC11.94□□□□□ -0.5
Ubp1Q811S7 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.94□□□□□ -0.5
Ubp1Q811S7 Gm19994-201ENSMUST00000217086 586 ntBASIC11.94□□□□□ -0.5
Ubp1Q811S7 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.94□□□□□ -0.5
Ubp1Q811S7 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubp1Q811S7 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubp1Q811S7 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Ubp1Q811S7 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubp1Q811S7 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubp1Q811S7 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubp1Q811S7 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms