Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Rif1Q6PR54 Gm11544-201ENSMUST00000120215 382 ntBASIC10.22□□□□□ -0.77
Rif1Q6PR54 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Rif1Q6PR54 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC10.22□□□□□ -0.77
Rif1Q6PR54 Gm29548-201ENSMUST00000187012 694 ntBASIC10.22□□□□□ -0.77
Rif1Q6PR54 Gm28105-201ENSMUST00000187788 694 ntBASIC10.22□□□□□ -0.77
Rif1Q6PR54 Gm5190-201ENSMUST00000192434 357 ntBASIC10.22□□□□□ -0.77
Rif1Q6PR54 Gm37638-201ENSMUST00000194337 1123 ntBASIC10.22□□□□□ -0.77
Rif1Q6PR54 Gm43852-201ENSMUST00000202098 917 ntBASIC10.22□□□□□ -0.77
Rif1Q6PR54 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Rif1Q6PR54 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC10.22□□□□□ -0.77
Rif1Q6PR54 Gm8268-201ENSMUST00000209683 458 ntBASIC10.22□□□□□ -0.77
Rif1Q6PR54 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC10.22□□□□□ -0.77
Rif1Q6PR54 AC114645.1-201ENSMUST00000215831 187 ntBASIC10.22□□□□□ -0.77
Rif1Q6PR54 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC10.22□□□□□ -0.77
Rif1Q6PR54 CT025603.1-201ENSMUST00000224040 448 ntBASIC10.22□□□□□ -0.77
Rif1Q6PR54 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Rif1Q6PR54 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Rif1Q6PR54 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.77
Rif1Q6PR54 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Rif1Q6PR54 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Rif1Q6PR54 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Rif1Q6PR54 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.77
Rif1Q6PR54 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Rif1Q6PR54 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Rif1Q6PR54 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.21□□□□□ -0.77
Rif1Q6PR54 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Rif1Q6PR54 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Rif1Q6PR54 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.21□□□□□ -0.77
Rif1Q6PR54 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Rif1Q6PR54 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC10.21□□□□□ -0.77
Rif1Q6PR54 Gm6946-201ENSMUST00000182237 987 ntBASIC10.21□□□□□ -0.77
Rif1Q6PR54 Gm42937-201ENSMUST00000197360 752 ntBASIC10.21□□□□□ -0.77
Rif1Q6PR54 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Rif1Q6PR54 Gm5291-201ENSMUST00000201965 899 ntBASIC10.21□□□□□ -0.77
Rif1Q6PR54 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC10.21□□□□□ -0.77
Rif1Q6PR54 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Rif1Q6PR54 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rif1Q6PR54 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.21□□□□□ -0.78
Rif1Q6PR54 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rif1Q6PR54 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rif1Q6PR54 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Rif1Q6PR54 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Rif1Q6PR54 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rif1Q6PR54 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rif1Q6PR54 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Rif1Q6PR54 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rif1Q6PR54 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Rif1Q6PR54 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Rif1Q6PR54 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Rif1Q6PR54 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.78
Rif1Q6PR54 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Rif1Q6PR54 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Rif1Q6PR54 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rif1Q6PR54 n-R5s84-201ENSMUST00000122591 109 ntBASIC10.21□□□□□ -0.78
Rif1Q6PR54 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC10.21□□□□□ -0.78
Rif1Q6PR54 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC10.21□□□□□ -0.78
Rif1Q6PR54 Gm26982-201ENSMUST00000182250 1151 ntBASIC10.21□□□□□ -0.78
Rif1Q6PR54 Gm18304-201ENSMUST00000189162 546 ntBASIC10.21□□□□□ -0.78
Rif1Q6PR54 Gm43506-201ENSMUST00000200675 753 ntBASIC10.21□□□□□ -0.78
Rif1Q6PR54 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Rif1Q6PR54 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC10.21□□□□□ -0.78
Rif1Q6PR54 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.21□□□□□ -0.78
Rif1Q6PR54 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rif1Q6PR54 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rif1Q6PR54 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rif1Q6PR54 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Rif1Q6PR54 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.2□□□□□ -0.78
Rif1Q6PR54 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Rif1Q6PR54 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Rif1Q6PR54 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rif1Q6PR54 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rif1Q6PR54 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rif1Q6PR54 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rif1Q6PR54 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rif1Q6PR54 Gm15707-201ENSMUST00000118804 996 ntBASIC10.2□□□□□ -0.78
Rif1Q6PR54 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC10.2□□□□□ -0.78
Rif1Q6PR54 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Rif1Q6PR54 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Rif1Q6PR54 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Rif1Q6PR54 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Rif1Q6PR54 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Rif1Q6PR54 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
Rif1Q6PR54 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Rif1Q6PR54 AC164099.1-201ENSMUST00000227780 333 ntBASIC10.2□□□□□ -0.78
Rif1Q6PR54 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rif1Q6PR54 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.2□□□□□ -0.78
Rif1Q6PR54 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.2□□□□□ -0.78
Rif1Q6PR54 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rif1Q6PR54 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rif1Q6PR54 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Rif1Q6PR54 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rif1Q6PR54 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rif1Q6PR54 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC10.2□□□□□ -0.78
Rif1Q6PR54 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rif1Q6PR54 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Rif1Q6PR54 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Rif1Q6PR54 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Rif1Q6PR54 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rif1Q6PR54 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms