Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rc3h1Q4VGL6 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rc3h1Q4VGL6 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rc3h1Q4VGL6 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rc3h1Q4VGL6 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rc3h1Q4VGL6 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Rc3h1Q4VGL6 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.96□□□□□ -0.18
Rc3h1Q4VGL6 Matn2-203ENSMUST00000226766 3252 ntBASIC13.96□□□□□ -0.18
Rc3h1Q4VGL6 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.96□□□□□ -0.18
Rc3h1Q4VGL6 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.18
Rc3h1Q4VGL6 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Rc3h1Q4VGL6 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rc3h1Q4VGL6 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.96□□□□□ -0.18
Rc3h1Q4VGL6 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rc3h1Q4VGL6 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rc3h1Q4VGL6 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Rc3h1Q4VGL6 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rc3h1Q4VGL6 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Rc3h1Q4VGL6 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rc3h1Q4VGL6 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rc3h1Q4VGL6 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rc3h1Q4VGL6 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rc3h1Q4VGL6 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rc3h1Q4VGL6 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.95□□□□□ -0.18
Rc3h1Q4VGL6 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Rc3h1Q4VGL6 Gm14263-201ENSMUST00000117955 746 ntBASIC13.95□□□□□ -0.18
Rc3h1Q4VGL6 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rc3h1Q4VGL6 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC13.95□□□□□ -0.18
Rc3h1Q4VGL6 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.95□□□□□ -0.18
Rc3h1Q4VGL6 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rc3h1Q4VGL6 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rc3h1Q4VGL6 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rc3h1Q4VGL6 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.95□□□□□ -0.18
Rc3h1Q4VGL6 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rc3h1Q4VGL6 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rc3h1Q4VGL6 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rc3h1Q4VGL6 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Rc3h1Q4VGL6 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.95□□□□□ -0.18
Rc3h1Q4VGL6 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rc3h1Q4VGL6 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rc3h1Q4VGL6 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rc3h1Q4VGL6 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.95□□□□□ -0.18
Rc3h1Q4VGL6 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rc3h1Q4VGL6 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Gm43807-201ENSMUST00000200678 1781 ntBASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Gm15610-201ENSMUST00000120584 195 ntBASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Gm13461-201ENSMUST00000120980 662 ntBASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Gm10051-201ENSMUST00000145209 414 ntBASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Mir3547-201ENSMUST00000175461 88 ntBASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Gm9785-201ENSMUST00000062642 1006 ntBASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Gm10288-201ENSMUST00000084614 537 ntBASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rc3h1Q4VGL6 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rc3h1Q4VGL6 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rc3h1Q4VGL6 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rc3h1Q4VGL6 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Rc3h1Q4VGL6 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC13.93□□□□□ -0.18
Rc3h1Q4VGL6 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC13.93□□□□□ -0.18
Rc3h1Q4VGL6 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms