Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.84□□□□□ -0.51
Q3KNL4 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.84□□□□□ -0.51
Q3KNL4 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Q3KNL4 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Q3KNL4 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Q3KNL4 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.83□□□□□ -0.51
Q3KNL4 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Q3KNL4 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Q3KNL4 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Q3KNL4 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Q3KNL4 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Q3KNL4 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.83□□□□□ -0.52
Q3KNL4 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Q3KNL4 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Q3KNL4 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.83□□□□□ -0.52
Q3KNL4 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Q3KNL4 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Q3KNL4 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Q3KNL4 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Q3KNL4 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Q3KNL4 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Q3KNL4 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Q3KNL4 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Q3KNL4 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Q3KNL4 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Q3KNL4 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Q3KNL4 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.83□□□□□ -0.52
Q3KNL4 Gm10434-201ENSMUST00000101158 471 ntBASIC11.83□□□□□ -0.52
Q3KNL4 Gm13226-201ENSMUST00000117838 404 ntBASIC11.83□□□□□ -0.52
Q3KNL4 Gm14660-201ENSMUST00000119809 575 ntBASIC11.83□□□□□ -0.52
Q3KNL4 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.83□□□□□ -0.52
Q3KNL4 Gm13570-201ENSMUST00000140763 309 ntBASIC11.83□□□□□ -0.52
Q3KNL4 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Q3KNL4 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.83□□□□□ -0.52
Q3KNL4 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Q3KNL4 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.83□□□□□ -0.52
Q3KNL4 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.83□□□□□ -0.52
Q3KNL4 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Q3KNL4 Gm37008-201ENSMUST00000195712 319 ntBASIC11.83□□□□□ -0.52
Q3KNL4 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Q3KNL4 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Q3KNL4 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Q3KNL4 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.83□□□□□ -0.52
Q3KNL4 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Q3KNL4 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Q3KNL4 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Q3KNL4 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Q3KNL4 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Q3KNL4 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Q3KNL4 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Q3KNL4 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3KNL4 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Q3KNL4 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3KNL4 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3KNL4 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3KNL4 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3KNL4 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3KNL4 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Q3KNL4 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3KNL4 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Q3KNL4 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3KNL4 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Q3KNL4 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3KNL4 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3KNL4 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3KNL4 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3KNL4 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3KNL4 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Q3KNL4 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Q3KNL4 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Q3KNL4 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3KNL4 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.82□□□□□ -0.52
Q3KNL4 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.82□□□□□ -0.52
Q3KNL4 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3KNL4 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.82□□□□□ -0.52
Q3KNL4 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3KNL4 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Q3KNL4 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Q3KNL4 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.82□□□□□ -0.52
Q3KNL4 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3KNL4 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3KNL4 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Q3KNL4 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3KNL4 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3KNL4 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3KNL4 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3KNL4 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.82□□□□□ -0.52
Q3KNL4 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3KNL4 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Q3KNL4 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3KNL4 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.82□□□□□ -0.52
Q3KNL4 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.82□□□□□ -0.52
Q3KNL4 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Q3KNL4 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Q3KNL4 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3KNL4 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3KNL4 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3KNL4 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3KNL4 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
Q3KNL4 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms