Protein–RNA interactions for Protein: P34928

Apoc1, Apolipoprotein C-I, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoc1P34928 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Apoc1P34928 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.53□□□□□ -0.72
Apoc1P34928 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.53□□□□□ -0.72
Apoc1P34928 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC10.53□□□□□ -0.72
Apoc1P34928 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.53□□□□□ -0.72
Apoc1P34928 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.53□□□□□ -0.72
Apoc1P34928 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Apoc1P34928 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Apoc1P34928 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Apoc1P34928 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Apoc1P34928 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Apoc1P34928 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Apoc1P34928 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Apoc1P34928 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Apoc1P34928 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Apoc1P34928 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
Apoc1P34928 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.53□□□□□ -0.72
Apoc1P34928 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Apoc1P34928 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.53□□□□□ -0.72
Apoc1P34928 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Apoc1P34928 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Apoc1P34928 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Apoc1P34928 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Apoc1P34928 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Apoc1P34928 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Apoc1P34928 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Apoc1P34928 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Apoc1P34928 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Apoc1P34928 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC10.52□□□□□ -0.72
Apoc1P34928 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.52□□□□□ -0.72
Apoc1P34928 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Apoc1P34928 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Apoc1P34928 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Apoc1P34928 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.52□□□□□ -0.72
Apoc1P34928 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Apoc1P34928 Gm8131-201ENSMUST00000213783 1570 ntBASIC10.52□□□□□ -0.72
Apoc1P34928 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Apoc1P34928 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Apoc1P34928 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Apoc1P34928 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.72
Apoc1P34928 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Apoc1P34928 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.52□□□□□ -0.73
Apoc1P34928 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
Apoc1P34928 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Apoc1P34928 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Apoc1P34928 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Apoc1P34928 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Apoc1P34928 Gm12390-201ENSMUST00000117897 397 ntBASIC10.52□□□□□ -0.73
Apoc1P34928 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC10.52□□□□□ -0.73
Apoc1P34928 Gm7809-201ENSMUST00000153199 742 ntBASIC10.52□□□□□ -0.73
Apoc1P34928 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Apoc1P34928 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC10.52□□□□□ -0.73
Apoc1P34928 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC10.52□□□□□ -0.73
Apoc1P34928 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.52□□□□□ -0.73
Apoc1P34928 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10.52□□□□□ -0.73
Apoc1P34928 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.52□□□□□ -0.73
Apoc1P34928 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Apoc1P34928 AC122459.1-201ENSMUST00000228373 885 ntBASIC10.52□□□□□ -0.73
Apoc1P34928 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Apoc1P34928 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Apoc1P34928 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Apoc1P34928 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Apoc1P34928 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Apoc1P34928 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
Apoc1P34928 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Apoc1P34928 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Apoc1P34928 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Apoc1P34928 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Apoc1P34928 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Apoc1P34928 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Apoc1P34928 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Apoc1P34928 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Apoc1P34928 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Apoc1P34928 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Apoc1P34928 Gm13127-201ENSMUST00000118978 1389 ntBASIC10.52□□□□□ -0.73
Apoc1P34928 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC10.52□□□□□ -0.73
Apoc1P34928 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Apoc1P34928 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Apoc1P34928 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Apoc1P34928 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Apoc1P34928 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Apoc1P34928 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Apoc1P34928 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Apoc1P34928 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Apoc1P34928 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Apoc1P34928 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Apoc1P34928 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Apoc1P34928 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Apoc1P34928 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Apoc1P34928 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Apoc1P34928 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Apoc1P34928 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Apoc1P34928 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Apoc1P34928 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Apoc1P34928 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.51□□□□□ -0.73
Apoc1P34928 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.51□□□□□ -0.73
Apoc1P34928 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Apoc1P34928 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Apoc1P34928 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Apoc1P34928 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms