Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Mmp3P28862 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC12.88□□□□□ -0.35
Mmp3P28862 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.88□□□□□ -0.35
Mmp3P28862 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Mmp3P28862 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp3P28862 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.88□□□□□ -0.35
Mmp3P28862 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp3P28862 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Mmp3P28862 Cog3-203ENSMUST00000227473 4197 ntBASIC12.88□□□□□ -0.35
Mmp3P28862 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp3P28862 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp3P28862 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp3P28862 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Mmp3P28862 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp3P28862 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp3P28862 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp3P28862 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp3P28862 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp3P28862 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp3P28862 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Mmp3P28862 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp3P28862 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp3P28862 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp3P28862 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp3P28862 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.88□□□□□ -0.35
Mmp3P28862 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Mmp3P28862 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Mmp3P28862 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Mmp3P28862 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.87□□□□□ -0.35
Mmp3P28862 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Mmp3P28862 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.87□□□□□ -0.35
Mmp3P28862 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Mmp3P28862 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Mmp3P28862 Gm11956-201ENSMUST00000119525 512 ntBASIC12.87□□□□□ -0.35
Mmp3P28862 Gm4726-201ENSMUST00000135604 736 ntBASIC12.87□□□□□ -0.35
Mmp3P28862 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Mmp3P28862 Gm7666-201ENSMUST00000146631 819 ntBASIC12.87□□□□□ -0.35
Mmp3P28862 Gm6019-201ENSMUST00000148369 736 ntBASIC12.87□□□□□ -0.35
Mmp3P28862 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.87□□□□□ -0.35
Mmp3P28862 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Mmp3P28862 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC12.87□□□□□ -0.35
Mmp3P28862 Gm9132-201ENSMUST00000210182 832 ntBASIC12.87□□□□□ -0.35
Mmp3P28862 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.87□□□□□ -0.35
Mmp3P28862 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Mmp3P28862 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.87□□□□□ -0.35
Mmp3P28862 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Mmp3P28862 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Mmp3P28862 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Mmp3P28862 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Mmp3P28862 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Mmp3P28862 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.87□□□□□ -0.35
Mmp3P28862 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Mmp3P28862 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Mmp3P28862 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Mmp3P28862 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Mmp3P28862 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Mmp3P28862 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.87□□□□□ -0.35
Mmp3P28862 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Mmp3P28862 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp3P28862 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp3P28862 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp3P28862 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp3P28862 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp3P28862 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp3P28862 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp3P28862 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp3P28862 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.86□□□□□ -0.35
Mmp3P28862 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp3P28862 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp3P28862 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp3P28862 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp3P28862 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp3P28862 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Mmp3P28862 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Mmp3P28862 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp3P28862 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp3P28862 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp3P28862 Mir7032-201ENSMUST00000185154 79 ntBASIC12.86□□□□□ -0.35
Mmp3P28862 Gm9540-201ENSMUST00000188230 478 ntBASIC12.86□□□□□ -0.35
Mmp3P28862 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.86□□□□□ -0.35
Mmp3P28862 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.86□□□□□ -0.35
Mmp3P28862 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.86□□□□□ -0.35
Mmp3P28862 Gm17831-201ENSMUST00000205579 900 ntBASIC12.86□□□□□ -0.35
Mmp3P28862 Gm44545-201ENSMUST00000208262 746 ntBASIC12.86□□□□□ -0.35
Mmp3P28862 Gm44551-201ENSMUST00000208804 171 ntBASIC12.86□□□□□ -0.35
Mmp3P28862 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.86□□□□□ -0.35
Mmp3P28862 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp3P28862 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.86□□□□□ -0.35
Mmp3P28862 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp3P28862 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Mmp3P28862 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp3P28862 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.86□□□□□ -0.35
Mmp3P28862 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.86□□□□□ -0.35
Mmp3P28862 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp3P28862 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp3P28862 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp3P28862 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Mmp3P28862 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp3P28862 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp3P28862 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms