Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a3E9PWQ3 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.67□□□□□ -0.54
Col6a3E9PWQ3 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.67□□□□□ -0.54
Col6a3E9PWQ3 Gm13777-201ENSMUST00000118208 345 ntBASIC11.67□□□□□ -0.54
Col6a3E9PWQ3 Gm23899-201ENSMUST00000158112 90 ntBASIC11.67□□□□□ -0.54
Col6a3E9PWQ3 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a3E9PWQ3 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.67□□□□□ -0.54
Col6a3E9PWQ3 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Col6a3E9PWQ3 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a3E9PWQ3 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Col6a3E9PWQ3 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a3E9PWQ3 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a3E9PWQ3 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a3E9PWQ3 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a3E9PWQ3 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.67□□□□□ -0.54
Col6a3E9PWQ3 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a3E9PWQ3 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a3E9PWQ3 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a3E9PWQ3 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a3E9PWQ3 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Gm6024-201ENSMUST00000117850 1558 ntBASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Gm16214-201ENSMUST00000143710 1388 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Gm6098-201ENSMUST00000180234 330 ntBASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Gm10015-201ENSMUST00000072570 465 ntBASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Gm12028-201ENSMUST00000118065 436 ntBASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Gm5529-201ENSMUST00000165691 891 ntBASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Gm6970-201ENSMUST00000169692 666 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Gm29783-201ENSMUST00000219398 369 ntBASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Gm35412-201ENSMUST00000220437 999 ntBASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 CU025215.1-201ENSMUST00000222986 603 ntBASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Mir7221-201ENSMUST00000184009 72 ntBASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 AC133496.1-201ENSMUST00000223891 743 ntBASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a3E9PWQ3 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a3E9PWQ3 Gm5431-201ENSMUST00000109209 1701 ntTSL 5 BASIC11.65□□□□□ -0.54
Col6a3E9PWQ3 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a3E9PWQ3 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a3E9PWQ3 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a3E9PWQ3 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a3E9PWQ3 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Col6a3E9PWQ3 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a3E9PWQ3 Gm13284-201ENSMUST00000121020 547 ntBASIC11.65□□□□□ -0.54
Col6a3E9PWQ3 Gm12037-201ENSMUST00000123160 308 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a3E9PWQ3 Ighv1-8-201ENSMUST00000192236 293 ntBASIC11.65□□□□□ -0.54
Col6a3E9PWQ3 Gm42660-201ENSMUST00000197733 947 ntBASIC11.65□□□□□ -0.54
Col6a3E9PWQ3 Gm30946-201ENSMUST00000198288 724 ntBASIC11.65□□□□□ -0.54
Col6a3E9PWQ3 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a3E9PWQ3 Gm18164-201ENSMUST00000213769 927 ntBASIC11.65□□□□□ -0.54
Col6a3E9PWQ3 Gm18166-201ENSMUST00000215557 927 ntBASIC11.65□□□□□ -0.54
Col6a3E9PWQ3 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a3E9PWQ3 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a3E9PWQ3 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.65□□□□□ -0.54
Col6a3E9PWQ3 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a3E9PWQ3 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a3E9PWQ3 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Col6a3E9PWQ3 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a3E9PWQ3 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a3E9PWQ3 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a3E9PWQ3 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC11.65□□□□□ -0.54
Col6a3E9PWQ3 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Col6a3E9PWQ3 Gm5738-201ENSMUST00000206016 779 ntBASIC11.65□□□□□ -0.54
Col6a3E9PWQ3 Gm3198-201ENSMUST00000208725 1026 ntBASIC11.65□□□□□ -0.54
Col6a3E9PWQ3 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a3E9PWQ3 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a3E9PWQ3 Olfr403-201ENSMUST00000076675 942 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Col6a3E9PWQ3 Olfr43-201ENSMUST00000078936 1092 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Col6a3E9PWQ3 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms