Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Gm15528-201ENSMUST00000117821 864 ntBASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Gm15610-201ENSMUST00000120584 195 ntBASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Gm15982-201ENSMUST00000121681 554 ntBASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Gm27444-201ENSMUST00000184157 137 ntBASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Id2-203ENSMUST00000222667 958 ntBASIC10.18□□□□□ -0.78
Ubr5Q80TP3 AC125409.3-201ENSMUST00000223488 653 ntBASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Gm12247-201ENSMUST00000117585 670 ntBASIC10.18□□□□□ -0.78
Ubr5Q80TP3 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Gm29543-201ENSMUST00000188138 967 ntBASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Gm31274-201ENSMUST00000197356 229 ntBASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Gm5996-201ENSMUST00000211110 718 ntBASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Gm5178-201ENSMUST00000219380 898 ntBASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ubr5Q80TP3 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.17□□□□□ -0.78
Ubr5Q80TP3 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Gm6024-201ENSMUST00000117850 1558 ntBASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Gm11405-201ENSMUST00000118689 1556 ntBASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Gm13284-201ENSMUST00000121020 547 ntBASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Gm26174-201ENSMUST00000158415 219 ntBASIC10.17□□□□□ -0.78
Ubr5Q80TP3 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC10.17□□□□□ -0.78
Ubr5Q80TP3 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Ighv1-70-201ENSMUST00000196509 351 ntBASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Gm5040-201ENSMUST00000218609 800 ntBASIC10.17□□□□□ -0.78
Ubr5Q80TP3 AC134601.2-201ENSMUST00000221071 130 ntBASIC10.17□□□□□ -0.78
Ubr5Q80TP3 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ubr5Q80TP3 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ubr5Q80TP3 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms